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Information on SUBCLASS 4.76.1
Subclass Accession number: 3185
Subclass: 4.76.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.2 (>50 %)  2.2.1 (>50 %)  2.2.1.1
GO : GO:0004802 (>50 %)  GO:0005509 (>50 %)  GO:0016744 (>50 %)  
SCOP : 52517 (>75 %)  52518 (>75 %)  88735 (>75 %)  
Number of loops: 3

Average sequence ID (%) : 35.2 +/- 23.2
Average RMSD (Å) : 0.400 +/- 0.173

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: hppGhpEX
(φψ)-conformation: bbaepbaa
Pattern: [IL][HQR][EY][G][IV][NR][E][FHL][AG][AM][GT][AC]x[AMW]x[AG][AI][AS]
Conservation:0.348-0.260-0.2512.6130.7440.1311.853-1.1040.359-0.517-0.2700.296-1.140-1.104-1.0110.105-0.768-0.024
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gpu_A_4111gpu   A412429IRYGIREHAMGAIMNGISEE--S-HHHHHHHHHHHHxxaexbaaaaaaaaaaaa
1l8a_A_5651l8a   A565582LQEGINELGAGCSWLAAAEE--S-HHHHHHHHHHHHxbaexbaaaaaaaaaaaa
1qgd_A_4041qgd   A405422IHYGVREFGMTAIANGISEE--S-HHHHHHHHHHHHbxaexbaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gpu_A_4111gpu   A     THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE I - 416
1gpu_A_4111gpu   A     THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE E - 418
1l8a_A_5651l8a   A     TDPTHIAMIN DIPHOSPHATE I - 569
1l8a_A_5651l8a   A     TDPTHIAMIN DIPHOSPHATE E - 571
1qgd_A_4041qgd   A     TPPTHIAMINE DIPHOSPHATE V - 409
1qgd_A_4041qgd   A     TPPTHIAMINE DIPHOSPHATE E - 411
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gpu_A_4111gpu   A AC4THD BINDING SITE FOR CHAIN BE - 418
1qgd_A_4041qgd   A TPBCOFACTOR BINDINGE - 411

Clusters included in this Subclass
CLUSTER: EH.3.263