Information on SUBCLASS 4.26.1 |
Subclass Accession number: 319
Subclass: 4.26.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 12.8 +/- 16.5 Average RMSD (Å) : 0.714 +/- 0.353 Consensus geometry
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Consensus Sequence: | pXXphXXX |
(φψ)-conformation: | aappbabb |
Pattern: | [deqry] | [afilp] | x | [ekqr] | x | [lmt] | [denq] | [AFGV] | [DEGT] | [adegt] | [iklv] | [hivwy] | [imv] |
Conservation: | -0.535 | -1.480 | -1.146 | 0.942 | -0.192 | 0.706 | 0.772 | 0.004 | 0.920 | -1.020 | 0.072 | -0.908 | 1.865 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1chm_A_86 | 1chm | A | 86 | 98 | QPWRRTVGTDNIV | HHHHH--SSEEEE | aaaaaxxbabbbb |
1euh_A_414 | 1euh | A | 419 | 431 | GIAEQLEVGTVHI | HHHHHS-SSEEEE | aaaaaxxbabbbx |
1ii7_A_315 | 1ii7 | A | 316 | 328 | EIKELLNVEYLKI | HHHHH---SEEEE | aaaaaxxbabbbb |
1j1i_A_88 | 1j1i | A | 97 | 109 | DFIKAMNFDGKVS | HHHHHS--SS-EE | aaaaaxxbabxbx |
1ky8_A_432 | 1ky8 | A | 437 | 449 | RAVRLLEVGAIYI | HHHHH--SSEEEE | aaaaaxxbabbbx |
1mjf_A_87 | 1mjf | A | 90 | 102 | REVLQHDVDEVIM | HHHTTS--SEEEE | aaaaaxxxabbbb |
1o04_A_436 | 1o04 | A | 441 | 453 | YLSQALQAGTVWV | HHHHH--SSEEEE | aaaaaxxbabbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1o04_A_436 | 1o04 | A | EDO1,2-ETHANEDIOL | A - 439 |
1o04_A_436 | 1o04 | A | EDO1,2-ETHANEDIOL | N - 440 |
1o04_A_436 | 1o04 | A | EDO1,2-ETHANEDIOL | Y - 441 |
1o04_A_436 | 1o04 | A | EDO1,2-ETHANEDIOL | L - 442 |
1o04_A_436 | 1o04 | A | EDO1,2-ETHANEDIOL | S - 443 |
1o04_A_436 | 1o04 | A | EDO1,2-ETHANEDIOL | Q - 444 |
1o04_A_436 | 1o04 | A | EDO1,2-ETHANEDIOL | A - 445 |
1o04_A_436 | 1o04 | A | GAIGUANIDINE | Q - 447 |
Clusters included in this Subclass |
CLUSTER: HE.5.61 |