Information on SUBCLASS 5.1.3 |
Subclass Accession number: 3194
Subclass: 5.1.3 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 19 Average sequence ID (%) : 22.2 +/- 31.1 Average RMSD (Å) : 0.879 +/- 0.382 Consensus geometry
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Consensus Sequence: | XhpXXXpXX |
(φψ)-conformation: | bbpaappaa |
Pattern: | [fgiltv] | x | [cfgilv] | [dhknprst] | x | [adeknrst] | [adnrst] | [denpqs] | x | [cdek] | [aenqrt] | [afily] | x | x | [acfgily] | x | [cde] | [dknrs] |
Conservation: | -0.027 | -1.183 | 1.192 | 1.051 | -1.756 | 1.025 | 0.022 | 1.939 | -0.950 | 0.950 | 0.286 | -0.644 | -0.268 | 0.260 | -0.979 | -1.065 | 0.636 | -0.490 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b5p_A_359 | 1b5p | A | 360 | 377 | VRLSYATSEENLRKALER | EEEE--S-HHHHHHHHHH | bxbbaabxaaaaaaaaaa |
1bw0_A_387 | 1bw0 | A | 388 | 405 | TRLTTTRPVEVYREAVER | EEEE--S-HHHHHHHHHH | bbbxaaxxaaaaaaaaaa |
1eep_A_68 | 1eep | A | 69 | 86 | GIIHKNMSIEAQRKEIEK | EEE-SSS-HHHHHHHHHH | bbpxaabpaaaaaaaaaa |
1g4i_A_81 | 1g4i | A | 82 | 99 | ITCSSENNACEAFICNCD | EEE-TTS-HHHHHHHHHH | xbxxaapxaaaaaaaaaa |
1hn4_A_81 | 1hn4 | A | 82 | 99 | ITCNSKNNACEAFICNCD | EEE-TT--HHHHHHHHHH | bbxxaapxaaaaaaaaaa |
1hqz_1_80 | 1hqz | 1 | 85 | 102 | GWCPDSAPLKTRASFAAN | EE--TTS-HHHHHHHHHH | xxbxaaxpaaaaaaaaaa |
1j32_A_362 | 1j32 | A | 362 | 379 | IRLSYATDLDTIKRGMER | EEEE--S-HHHHHHHHHH | bbbbaabxaaaaaaaaaa |
1luc_B_190 | 1luc | B | 190 | 207 | LVFRWDDSNAQRKEYAGL | EEE-TTS-HHHHHHHHHH | bbxxaaxxaaaaaaaaaa |
1m2o_A_123 | 1m2o | A | 126 | 143 | FVVDLTSETENLDSLKES | EEEE--S-HHHHHHHHHH | xbbxaabpaaaaaaaaaa |
1m8t_A_82 | 1m8t | A | 82 | 99 | LTCKADNDECAAFVCDCD | EEE-TT--HHHHHHHHHH | bbxpaapxaaaaaaaaaa |
1mh8_A_76 | 1mh8 | A | 77 | 94 | LTCKGRNNACAATTCDCD | EEE-TT--HHHHHHHHHH | bbxxaaxxaaaaaaaaaa |
1mjn_A_130 | 1mjn | A | 136 | 153 | FDGSMSLQPDEFQKILDF | EE-BTT--HHHHHHHHHH | bxaxaaxxaaaaaaaaaa |
1o4s_A_351 | 1o4s | A | 352 | 369 | VRLSFATSIERLTEALDR | EEEE--S-HHHHHHHHHH | bbbxaabxaaaaaaaaaa |
1ows_A_76 | 1ows | A | 77 | 94 | LTCKGNNNACAASSCDCD | EEE-TT--HHHHHHHHHH | bbxxaaxxaaaaaaaaaa |
1ows_B_76 | 1ows | B | 77 | 94 | LTCSGENSACAATTCDCD | EEE-TT--HHHHHHHHHH | xbxxaaxxaaaaaaaaaa |
1s6b_A_76 | 1s6b | A | 77 | 94 | LSCSGSNNSCAATVCDCD | EEE-TT--HHHHHHHHHH | xbxxaapxaaaaaaaaaa |
1s6b_B_76 | 1s6b | B | 77 | 94 | LTCTGRNNACAASVCDCD | EEE-S---HHHHHHHHHH | bbxxaabxaaaaaaaaaa |
1sz8_A_76 | 1sz8 | A | 77 | 94 | LTCKGDNNACAASVCDCD | EEE-TT--HHHHHHHHHH | bbxxaaxxaaaaaaaaaa |
5p2p_A_82 | 5p2p | A | 82 | 99 | ITCNSKNNACEAFICNCD | EEE-TTS-HHHHHHHHHH | xbxpaaxxaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1b5p_A_359 | 1b5p | A | PO4PHOSPHATE ION | R - 361 |
1g4i_A_81 | 1g4i | A | MPD2-METHYL-2,4-PENTANEDIOL | F - 106 |
1hn4_A_81 | 1hn4 | A | MJI1-HEXADECYL-3-TRIFLUOROETHYL-SN-GLYCERO-2-PHOSPHATE METHANE | D - 99 |
1hn4_A_81 | 1hn4 | A | MJI1-HEXADECYL-3-TRIFLUOROETHYL-SN-GLYCERO-2-PHOSPHATE METHANE | A - 102 |
1hn4_A_81 | 1hn4 | A | MJI1-HEXADECYL-3-TRIFLUOROETHYL-SN-GLYCERO-2-PHOSPHATE METHANE | F - 106 |
1mjn_A_130 | 1mjn | A | MGMAGNESIUM ION | D - 137 |
1mjn_A_130 | 1mjn | A | MGMAGNESIUM ION | S - 139 |
1mjn_A_130 | 1mjn | A | MGMAGNESIUM ION | M - 140 |
1mjn_A_130 | 1mjn | A | MGMAGNESIUM ION | S - 141 |
1mjn_A_130 | 1mjn | A | MGMAGNESIUM ION | L - 142 |
1ows_A_76 | 1ows | A | NAGN-ACETYL-D-GLUCOSAMINE | A - 97 |
1ows_A_76 | 1ows | A | NAGN-ACETYL-D-GLUCOSAMINE | F - 101 |
1s6b_B_76 | 1s6b | B | PO4PHOSPHATE ION | F - 101 |
5p2p_A_82 | 5p2p | A | CACALCIUM ION | N - 89 |
5p2p_A_82 | 5p2p | A | CACALCIUM ION | E - 92 |
5p2p_A_82 | 5p2p | A | DHGPHOSPHONIC ACID 2-DODECANOYLAMINO-HEXYL ESTER PROPYL ESTER | A - 102 |
5p2p_A_82 | 5p2p | A | DHGPHOSPHONIC ACID 2-DODECANOYLAMINO-HEXYL ESTER PROPYL ESTER | F - 106 |
Clusters included in this Subclass |
CLUSTER: EH.4.303 |
CLUSTER: EH.4.50 |
CLUSTER: EH.5.18 |
CLUSTER: EH.6.33 |
CLUSTER: EH.6.52 |