Logo
Information on SUBCLASS 5.3.2
Subclass Accession number: 3208
Subclass: 5.3.2 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 12

Average sequence ID (%) : 13.1 +/- 18.3
Average RMSD (Å) : 0.742 +/- 0.178

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: XXhXpXpXX
(φψ)-conformation: bbpaabpaa
Pattern: [afilt]x[cilvy][dep][adep][dhnqrt]xxxx[DEHQ][afiltv]x
Conservation:-0.629-0.952-0.5480.227-0.2650.441-0.075-0.089-0.911-0.4392.9370.586-0.283
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1awd_*_101awd   -1426IECPEDTYILDAAEE--TTS-HHHHHbbbpaabxaaaaa
1fvi_A_641fvi   A6779EISIEGATFQDTTEEE-TTS-HHHHHbxbxaaxxaaaaa
1fxi_A_121fxi   A1628ITVPDDEYILDVAEEE-TTS-HHHHHxbbxaabxaaaaa
1jj2_R_231jj2   R2638FAVDDRASKGEVAEEE-TT--HHHHHbbbxaaxxaaaaa
1lw3_A_2441lw3   A244256LVVPANIPDEELKEEEETT--HHHHHbbbpaabxaaaaa
1n62_A_131n62   A1729ALVEPRTLLIHFIEEE-TT-BHHHHHbbbxaaxxaaaaa
1oej_A_1751oej   A175187TYYPYQLSSEEVVEEEETTS-HHHHHbbbpaaxxaaaaa
1omh_A_2191omh   A219230.FDLAHIDRQQIE.EEETTS-HHHHH.bbxaabxaaaaa
1otj_A_2071otj   A207219TTRIVDVSEKESEEEEESSS-HHHHHxabxaabxaaaaa
1uw4_A_521uw4   A5668RRLPPTLTKEQLQEEE-TT--HHHHHbvxpaaxbaaaaa
2pia_*_2482pia   -249261FEIPANRSILEVLEEE-TTS-HHHHHbxxxaabxaaaaa
4fxc_*_154fxc   -1830IDCDDDTYILDAAEE--TTS-HHHHHbxbbaNbxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1awd_*_101awd   *     FESFE2/S2 (INORGANIC) CLUSTER L - 23
1fvi_A_641fvi   A     AMPADENOSINE MONOPHOSPHATE E - 67
1fxi_A_121fxi   A     FESFE2/S2 (INORGANIC) CLUSTER L - 25
1jj2_R_231jj2   R     MGMAGNESIUM ION K - 34
1oej_A_1751oej   A     NINICKEL (II) ION T - 175
1oej_A_1751oej   A     NINICKEL (II) ION Y - 177
2pia_*_2482pia   *     FESFE2/S2 (INORGANIC) CLUSTER L - 258
4fxc_*_154fxc   *     FESFE2/S2 (INORGANIC) CLUSTER L - 27

Clusters included in this Subclass
CLUSTER: EH.5.59
CLUSTER: EH.6.112