Information on SUBCLASS 4.28.1 |
Subclass Accession number: 321
Subclass: 4.28.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0008168 (>75 %) GO:0008757 (>75 %) GO:0016741 (>75 %) GO:0046914 (>75 %) SCOP : 53334 (>75 %) 53335 (>75 %) |
Number of loops: 7 Average sequence ID (%) : 27.5 +/- 21.5 Average RMSD (Å) : 0.571 +/- 0.377 Consensus geometry
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Consensus Sequence: | XVGXpGXh |
(φψ)-conformation: | aaeaapbb |
Pattern: | x | [acit] | [aqs] | x | [AFLMV] | x | [DRT] | [aikmv] | [IV] | [G] | x | [AEKST] | [G] | x | [IV] | [FITV] | [AGSV] | [civy] |
Conservation: | -0.642 | -0.383 | -0.271 | -0.910 | -0.261 | -0.455 | -0.230 | -0.651 | 1.102 | 2.292 | -1.097 | -0.288 | 2.292 | -0.451 | 1.015 | -0.097 | -0.302 | -0.664 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dl5_A_88 | 1dl5 | A | 89 | 106 | NAAVMSRVVGEKGLVVSV | HHHHHHHHH-TT-EEEEE | aaaaaaaaaeaaxbbbbb |
1ej0_A_64 | 1ej0 | A | 65 | 82 | WSQYVVTQIGGKGRIIAC | HHHHHHHHH-TT-EEEEE | aaaaaaaaaeaaxbbbbb |
1g8a_A_87 | 1g8a | A | 87 | 104 | TASHVSDIVGWEGKIFGI | HHHHHHHHH-TTSEEEEE | aaaaaaaaaeaabbbbxb |
1i1n_A_90 | 1i1n | A | 91 | 108 | LTACFARMVGCTGKVIGI | HHHHHHHHH-TT-EEEEE | aaaaaaaaaeaaxbbbbb |
1i9g_A_112 | 1i9g | A | 113 | 130 | LTLSLLRAVGPAGQVISY | HHHHHHHHH-TTSEEEEE | aaaaaaaaaeaabbbbbb |
1kp8_A_156 | 1kp8 | A | 161 | 178 | LIAEAMDKVGKEGVITVE | HHHHHHHHH-TTSEEEEE | aaaaaaaaaeaaxxbbbb |
1o54_A_113 | 1o54 | A | 114 | 131 | MCAVLARAVGSSGKVFAY | HHHHHHHHTTTT-EEEEE | aaaaaaaaaeaaxbbxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HE.4.83 |
CLUSTER: HE.5.78 |