Information on SUBCLASS 5.4.1 |
Subclass Accession number: 3211
Subclass: 5.4.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 32 Average sequence ID (%) : 10.4 +/- 13.8 Average RMSD (Å) : 0.913 +/- 0.246 Consensus geometry
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Consensus Sequence: | XXXXXhXXX |
(φψ)-conformation: | bbabpppaa |
Pattern: | x | x | x | [adeknrst] | x | x | [acfgilmpvy] | [dehknpst] | x | [adeknqrst] | x | x |
Conservation: | -0.692 | 0.068 | -0.365 | 0.475 | -0.444 | -1.431 | 1.074 | 1.444 | -1.457 | 1.474 | 0.357 | -0.502 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8d_*_220 | 1a8d | - | 227 | 238 | RIFCKALNPKEI | EEESS---HHHH | bbbabxxxaaaa |
1aln_*_119 | 1aln | - | 122 | 133 | ITVNYTPCGHCR | EEESS---HHHH | bbbabppxaaaa |
1b09_A_154 | 1b09 | A | 160 | 171 | NMWDFVLSPDEI | EEESS---HHHH | bbxabbxxaaaa |
1b65_A_251 | 1b65 | A | 255 | 266 | LATDLPLMPHQL | EEE-S---HHHH | bbbaxxbxaaaa |
1cer_O_271 | 1cer | O | 272 | 283 | AYTEDEIVLQDI | EEE-S---HHHH | bbbaxxxbaaaa |
1cl1_A_310 | 1cl1 | A | 313 | 324 | FVLKKKLNNEEL | EEESS---HHHH | bbxabxxxaaaa |
1dv8_A_163 | 1dv8 | A | 166 | 177 | WFSRSGKAWADA | EE-SS-B-HHHH | bbxabbbxaaaa |
1e87_A_95 | 1e87 | A | 98 | 109 | FISTVKRSWTSA | EE-SS-B-HHHH | bbxabbbxaaaa |
1g1t_A_2 | 1g1t | A | 4 | 15 | NTSTEAMTYDEA | EE-SS-B-HHHH | bbxaxxbxaaaa |
1g8m_A_318 | 1g8m | A | 320 | 331 | IALSDICDVPTA | EEESS-B-HHHH | xbbabpxxaaaa |
1gdh_A_172 | 1gdh | A | 175 | 186 | YFDTHRASSSDE | EE-SS---HHHH | bbbabxxpaaaa |
1h4v_B_357 | 1h4v | B | 358 | 369 | EYALAPRKPAKG | EE-SS---HHHH | bbxabwbxaaaa |
1ixh_*_52 | 1ixh | - | 53 | 64 | GASDAPLSDEKL | EEESS---HHHH | bbbaxxxxaaaa |
1j3v_A_84 | 1j3v | A | 86 | 97 | WVDATSGEPEAS | EEE-S---HHHH | bbxaxxbxaaaa |
1j8u_A_241 | 1j8u | A | 243 | 254 | RPVAGLLSSRDF | EE--S---HHHH | bwbabxxxaaaa |
1jhd_A_195 | 1jhd | A | 198 | 209 | FQTRNPMHRAHE | EEESS---HHHH | bxbaxxxxaaaa |
1jx4_A_295 | 1jx4 | A | 300 | 311 | RTFPHGISKETA | EE-SS---HHHH | bbbabxbxaaaa |
1knv_A_235 | 1knv | A | 238 | 249 | GASSEPVSKADD | EEESS---HHHH | bbbabxbxaaaa |
1l0w_A_319 | 1l0w | A | 323 | 334 | LALPKALSRKEV | EEESS---HHHH | bbxabxxxaaaa |
1mlw_A_228 | 1mlw | A | 230 | 241 | RPVAGYLSPRDF | EE-SSB--HHHH | bxbabxxxaaaa |
1n1t_A_604 | 1n1t | A | 610 | 621 | VLYNRRLNSSEI | EEESS---HHHH | bbbabxxxaaaa |
1no5_A_47 | 1no5 | A | 51 | 62 | IISEEPLDFLAR | EE-SS---HHHH | xxbabpppaaaa |
1pkx_A_317 | 1pkx | A | 319 | 330 | VALSDVCDVPTA | EEESS-B-HHHH | xbbabpxxaaaa |
1qlm_A_135 | 1qlm | A | 139 | 150 | LESSELPDEDVA | EE-SS---HHHH | bxbabxxxaaaa |
1rdl_1_116 | 1rdl | 1 | 118 | 129 | MSSVRRMPLNRA | EE-SS-B-HHHH | bbxabxbxaaaa |
1rgy_A_334 | 1rgy | A | 338 | 349 | MLANKSYPNPVR | EEESB---HHHH | bbbabxbpaaaa |
1s4n_A_156 | 1s4n | A | 158 | 169 | FLNDEPFTEEFK | EEESS---HHHH | bbbabxxxaaaa |
1s7j_A_19 | 1s7j | A | 24 | 35 | YVLEKWLPEAVM | EE-SS---HHHH | bxxabxxxaaaa |
1sac_A_152 | 1sac | A | 158 | 169 | YMWDSVLPPENI | EEESS---HHHH | bbbabxxxaaaa |
1sh0_A_344 | 1sh0 | A | 347 | 358 | VSTDIKLDPEKL | EEESS---HHHH | bbbaxxbxaaaa |
1uwv_A_205 | 1uwv | A | 205 | 216 | LRHTAPLSSADR | EEESS---HHHH | bxbabpxxaaaa |
2nac_A_216 | 2nac | A | 219 | 230 | YTDRHRLPESVE | EE-SS---HHHH | bbbabxxwaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1aln_*_119 | 1aln | * | ZNZN BINDING SITE. | C - 129 |
1aln_*_119 | 1aln | * | ZNZN BINDING SITE. | C - 132 |
1uwv_A_205 | 1uwv | A | AC5PO4 BINDING SITE FOR CHAIN A | R - 206 |
Clusters included in this Subclass |
CLUSTER: EH.4.109 |
CLUSTER: EH.4.144 |
CLUSTER: EH.4.245 |
CLUSTER: EH.5.213 |
CLUSTER: EH.5.24 |
CLUSTER: EH.5.57 |
CLUSTER: EH.6.11 |
CLUSTER: EH.6.59 |
CLUSTER: EH.6.60 |