Information on SUBCLASS 5.5.1 |
Subclass Accession number: 3214
Subclass: 5.5.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 16 Average sequence ID (%) : 28.6 +/- 23.1 Average RMSD (Å) : 0.481 +/- 0.191 Consensus geometry
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Consensus Sequence: | hhXXcXGKp |
(φψ)-conformation: | bbpplagaa |
Pattern: | [AILMPV] | [AFGILV] | [AFILV] | [afilmv] | [adgt] | x | [apqs] | [ADGKNS] | [acstv] | [G] | [DGKT] | [DEGNST] | [agnrst] | x | [ACFILTV] |
Conservation: | 0.065 | -0.389 | 0.260 | -0.645 | -0.292 | -1.204 | -0.186 | 0.159 | -0.201 | 3.309 | 0.393 | -0.035 | -0.682 | -0.258 | -0.294 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a5t_*_26 | 1a5t | - | 27 | 41 | LLIQALPGMGDDALI | EEEE--TTS-HHHHH | bbxbbxxvavaaaaa |
1ak2_*_18 | 1ak2 | - | 19 | 33 | AVLLGPPGAGKGTQA | EEEE--TTSSHHHHH | bbbbbxxvagaaaaa |
1aky_*_6 | 1aky | - | 7 | 21 | MVLIGPPGAGKGTQA | EEEE--TTSSHHHHH | bbbbbxpvagaaaaa |
1dar_*_12 | 1dar | - | 15 | 29 | IGIAAHIDAGKTTTT | EEEEE-TTS-HHHHH | bbbxbxpvagaaaaa |
1e79_D_151 | 1e79 | D | 152 | 166 | IGLFGGAGVGKTVLI | EEEEESTTSSHHHHH | bbbxbxxvagaaaaa |
1g29_1_31 | 1g29 | 1 | 32 | 46 | MILLGPSGCGKTTTL | EEEE-STTSSHHHHH | xbbbbwxvavaaaaa |
1j99_A_37 | 1j99 | A | 37 | 51 | VIILTYPKSGTNWLA | EEEE-STTSSHHHHH | bbxbbxpvagaaaaa |
1jbk_A_201 | 1jbk | A | 202 | 216 | PVLIGEPGVGKTAIV | EEEE--TTS-HHHHH | xbxbbxpvavaaaaa |
1jwy_B_27 | 1jwy | B | 28 | 42 | IVVVGSQSSGKSSVL | EEEEE-SSSSHHHHH | bbxbbxplagaaaaa |
1khb_A_277 | 1khb | A | 280 | 294 | LAAAFPSACGKTNLA | EEEE--TTS-HHHHH | bbbbbxpUagaaaaa |
1np6_A_9 | 1np6 | A | 10 | 24 | LAFAAWSGTGKTTLL | EEEE--TTS-HHHHH | bxbbbxpvavaaaaa |
1pjr_*_27 | 1pjr | - | 27 | 41 | LLIMAGAGSGKTRVL | EEEEE-TTS-HHHHH | bbbxxxpvavaaaaa |
1qde_A_61 | 1qde | A | 61 | 75 | VLAQAQSGTGKTGTF | EEEE--TTSSHHHHH | bbbxbxxvavaaaaa |
1qhx_A_5 | 1qhx | A | 6 | 20 | IILNGGSSAGKSGIV | EEEE--TTSSHHHHH | bbxbbxxvagaaaaa |
1so8_A_36 | 1so8 | A | 37 | 51 | AVLLDLPNSGGEAQA | EEEEE-TTSSHHHHH | bbxxbxxvavaaaaa |
3adk_*_10 | 3adk | - | 11 | 25 | IFVVGGPGSGKGTQC | EEEEE-TTSSHHHHH | bxbbbxxvavaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e79_D_151 | 1e79 | D | AT4ADP BINDING SITE FOR CHAIN D | G - 159 |
1e79_D_151 | 1e79 | D | AT4ADP BINDING SITE FOR CHAIN D | G - 161 |
1e79_D_151 | 1e79 | D | PLPLYSINE WITHIN THE P-LOOP (PHOSPHATE BINDING) MOTIF, GXXXXGKT/S. | K - 162 |
Clusters included in this Subclass |
CLUSTER: EH.4.139 |
CLUSTER: EH.5.47 |
CLUSTER: EH.6.258 |
CLUSTER: EH.7.19 |