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Information on SUBCLASS 5.6.1
Subclass Accession number: 3218
Subclass: 5.6.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 9.5 +/- 15.4
Average RMSD (Å) : 0.825 +/- 0.369

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XXXpXXXXp
(φψ)-conformation: bbaaapbaa
Pattern: [ILTVW][afiktv]xx[EGKQS]xx[knpt]x[denr]x[FILMTV]
Conservation:0.867-0.644-1.405-0.6141.461-1.137-0.6850.577-0.5771.015-0.2171.359
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1g57_A_411g57   A4455IFPAETMTVEQMEEETTT--HHHHbbxaaapbaaaa
1jp4_A_1911jp4   A193204TTTRSHSNKLVTEEESSS--HHHHbbpaaaxbaaaa
1k4i_A_401k4i   A4354IIAAESVTTEQMEEEGGG--HHHHbbxaaaxxaaaa
1kfu_L_2111kfu   L214225WYELKKPPPNLFEEETTS--TTHHbbxaaawxaaaa
1n2z_A_811n2z   A8394IAWRGGNAERQVEE-TTTS-HHHHxbbaaabxaaaa
1oa8_A_5881oa8   A588599LKKVEDLKTEDFEEEGGG--HHHHbbxaaapbaaaa
1pvy_A_291pvy   A3243VVASQFITPEHIEEEGGG--HHHHbbxaaaxbaaaa
5nul_*_315nul   -3243TINVSDVNIDELEEEGGG--HHHHbbxaaaxbaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1g57_A_411g57   A     CSCESIUM ION A - 47
1g57_A_411g57   A     CSCESIUM ION E - 48
1g57_A_411g57   A     CSCESIUM ION T - 49
1g57_A_411g57   A     CSCESIUM ION M - 50
1g57_A_411g57   A     CSCESIUM ION T - 58
1g57_A_411g57   A     CSCESIUM ION I - 59
1g57_A_411g57   A     CSCESIUM ION R - 60
1g57_A_411g57   A     CSCESIUM ION H - 61
1jp4_A_1911jp4   A     AMPADENOSINE MONOPHOSPHATE T - 194
1jp4_A_1911jp4   A     AMPADENOSINE MONOPHOSPHATE T - 195
1jp4_A_1911jp4   A     AMPADENOSINE MONOPHOSPHATE R - 196
1jp4_A_1911jp4   A     AMPADENOSINE MONOPHOSPHATE S - 197
1jp4_A_1911jp4   A     PO4PHOSPHATE ION H - 198
1jp4_A_1911jp4   A     AMPADENOSINE MONOPHOSPHATE H - 198
1k4i_A_401k4i   A     SULSULFATE ANION D - 41
1k4i_A_401k4i   A     MGMAGNESIUM ION D - 41
1n2z_A_811n2z   A     CNCCO-CYANOCOBALAMIN W - 85
1n2z_A_811n2z   A     CDCADMIUM ION R - 86
1n2z_A_811n2z   A     CDCADMIUM ION G - 87
1n2z_A_811n2z   A     CNCCO-CYANOCOBALAMIN G - 87
1n2z_A_811n2z   A     CNCCO-CYANOCOBALAMIN G - 88
1n2z_A_811n2z   A     CDCADMIUM ION N - 89
1n2z_A_811n2z   A     CNCCO-CYANOCOBALAMIN N - 89
1n2z_A_811n2z   A     CDCADMIUM ION A - 90
1n2z_A_811n2z   A     CDCADMIUM ION E - 91
1n2z_A_811n2z   A     CDCADMIUM ION R - 92
1pvy_A_291pvy   A     R5PRIBOSE-5-PHOSPHATE D - 30
1pvy_A_291pvy   A     ZNZINC ION D - 30
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1oa8_A_5881oa8   A AC1NA BINDING SITE FOR CHAIN AA - 603

Clusters included in this Subclass
CLUSTER: EH.6.49