ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 4.29.1

Subclass Accession number: 322
Subclass: 4.29.1

Type: HE alpha-beta
DB: ArchDB40

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : - (>50 %)  1 (>75 %)  1.2 (>75 %)  1.2.1 (>75 %)  11 (>50 %)
GO : GO:0004601 (>50 %)  GO:0016620 (>50 %)  GO:0016684 (>50 %)  GO:0016903 (>50 %)
SCOP : 53473 (>50 %)  53474 (>50 %)  53531 (>50 %)  53719 (>50 %)  53720 (>50 %)  53721 (>50 %)

Number of loops: 3

Average sequence ID (%) : 21.3 +/- 29.6
Average RMSD (Å) : 0.867 +/- 0.379

Consensus geometry

d (Å): 13

delta (°): 90-135

theta (°): 135-180

rho (°): 0-45

Consensus Sequence:	XhchXcXX
(φψ)-conformation:	aalpblbb

Pattern:	[FLY]	[AD]	[ST]	[FR]	[AM]	[ADG]	[AD]	[LY]	[AN]	x	x	[L]	x	x	[AL]	[DG]	[LY]	[GQR]	[DG]	x	[CTV]	[LV]	[GV]	[AGI]	[FHQ]
Conservation:	0.786	0.223	1.395	-0.116	0.164	-0.521	0.223	0.519	0.223	-1.114	-1.470	2.567	-1.233	-1.352	-0.013	1.093	0.519	-0.521	1.093	-1.114	-0.046	1.019	-0.690	-1.233	-0.402

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a8q_*_69	1a8q	-	69	93	FDTFADDLNDLLTDLDLRDVTLVAH	HHHHHHHHHHHHHHTT--SEEEEEE	aaaaaaaaaaaaaaalxblxbxbbb
1brt_*_73	1brt	-	73	97	YDTFAADLNTVLETLDLQDAVLVGF	HHHHHHHHHHHHHHHT--SEEEEEE	aaaaaaaaaaaaaaalxblxbxbbb
1pfk_A_258	1pfk	A	263	287	LASRMGAYAIDLLLAGYGGRCVGIQ	HHHHHHHHHHHHHHHT--SEEEEEE	aaaaaaaaaaaaaaavxbvbbxbbb

Clusters included in this Subclass

CLUSTER: HE.5.88