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Information on SUBCLASS 5.16.2
Subclass Accession number: 3246
Subclass: 5.16.2 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 70.6 +/- 14.5
Average RMSD (Å) : 0.380 +/- 0.130

Consensus geometry
d (Å): 17 delta (°): 45-90 theta (°): 45-90 rho (°): 270-315
Consensus Sequence: hWHpQXPXW
(φψ)-conformation: bbaplbpaa
Pattern: x[IMV][R][G][H][T][L][AIV][W][H][NS][Q]x[P][GS][W][LMV]x
Conservation:-1.025-0.6520.0930.4001.0120.093-0.213-0.8811.9311.012-0.5550.093-1.2860.706-0.6841.931-0.730-1.245
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bg4_*_801bg4   -8097LIRGHTLVWHSQLPGWVSEEEEEEEE-SSS--HHHHxbbxbwabbaxlbwaaaa
1i1w_A_791i1w   A7996LIRGHTLVWHSQLPSWVSEEEEEEEE-STT--HHHHxbbxbwabbaxlbpaaaa
1od8_A_771od8   A7794QVRGHTLAWHSQQPGWMQEEEEEEEE-SSS--HHHHxbxxbwabbablxxaaaa
1tux_*_791tux   -7996LIRGHTLVWHSQLPSWVVEEEEEEEE-SSS--HHHHxbbxbMabbaxlbxaaaa
1xyz_A_5921xyz   A592609QMRGHTLIWHNQNPSWLTEEEEEEEE-SSS--HHHHxbbxbwabbablbxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bg4_*_801bg4   *     GOLGLYCEROL H - 84
1bg4_*_801bg4   *     GOLGLYCEROL T - 85
1bg4_*_801bg4   *     GOLGLYCEROL W - 88
1bg4_*_801bg4   *     GOLGLYCEROL Q - 91
1i1w_A_791i1w   A     GOLGLYCEROL H - 83
1i1w_A_791i1w   A     GOLGLYCEROL T - 84
1i1w_A_791i1w   A     GOLGLYCEROL W - 87
1i1w_A_791i1w   A     GOLGLYCEROL S - 89
1i1w_A_791i1w   A     GOLGLYCEROL Q - 90
1od8_A_771od8   A     XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM H - 81
1od8_A_771od8   A     XYPBETA-D-XYLOPYRANOSE H - 81
1od8_A_771od8   A     XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM T - 82
1od8_A_771od8   A     XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM W - 85
1od8_A_771od8   A     XYPBETA-D-XYLOPYRANOSE W - 85
1od8_A_771od8   A     IMDIMIDAZOLE W - 85
1od8_A_771od8   A     XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM Q - 88
1od8_A_771od8   A     XYPBETA-D-XYLOPYRANOSE Q - 88
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1od8_A_771od8   A AC9XDL BINDING SITE FOR CHAIN AH - 81
1od8_A_771od8   A AC9XDL BINDING SITE FOR CHAIN AW - 85

Clusters included in this Subclass
CLUSTER: EH.5.156