Information on SUBCLASS 5.18.1 |
Subclass Accession number: 3248
Subclass: 5.18.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 11 Average sequence ID (%) : 42.2 +/- 28.9 Average RMSD (Å) : 0.445 +/- 0.364 Consensus geometry
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Consensus Sequence: | phXXpXhPp |
(φψ)-conformation: | bbpaaabaa |
Pattern: | [IMTV] | x | [FILM] | [EGK] | [CLT] | [fy] | [ADGKN] | [dknq] | [iktv] | [ASV] | [EP] | [eknr] | [ST] | [ACV] | [EGKNQRT] | [DN] | [FI] | x | [adeq] | [FLVY] | [ACSV] | [KNRT] |
Conservation: | 0.311 | -1.209 | 0.316 | 0.089 | -0.044 | -0.182 | -0.929 | -0.779 | -1.043 | -0.207 | 2.068 | -0.513 | 1.121 | -0.034 | -0.780 | 2.180 | 1.821 | -1.015 | -1.090 | -0.077 | 0.024 | -0.026 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a33_*_18 | 1a33 | - | 23 | 44 | IVMELYNDIAPRTCNNFLMLCT | EEEEE-TTT-HHHHHHHHHHHH | bbbbxxaaabaaaaaaaaaaaa |
1dyw_A_15 | 1dyw | A | 20 | 41 | IVMELYDDVVPKTAGNFRALCT | EEEEE-TTT-HHHHHHHHHHHH | xbbbbxaaabaaaaaaaaaaaa |
1h0p_A_39 | 1h0p | A | 44 | 65 | IVIGLFGKTVPKTATNFIELAK | EEEEE-TTTSHHHHHHHHHHHH | bbbxbxaaabaaaaaaaaaaaa |
1ihg_A_27 | 1ihg | A | 32 | 53 | IVLELFADIVPKTAENFRALCT | EEEEE-TTT-HHHHHHHHHHHH | bbbxbxaaabaaaaaaaaaaaa |
1ist_A_13 | 1ist | A | 18 | 39 | VVFKLYNDIVPKTAENFRALCT | EEEEE-TTTSHHHHHHHHHHHH | bbbbxxaaabaaaaaaaaaaaa |
1j2a_A_14 | 1j2a | A | 16 | 37 | IELELDKQKAPVSVQNFVDYVN | EEEEE-TTT-HHHHHHHHHHHH | bbbbxxaaabaaaaaaaaaaaa |
1lop_A_9 | 1lop | A | 11 | 32 | IVIKTFDDKAPETVKNFLDYCR | EEEEE-TTTSHHHHHHHHHHHH | bbbbxxaaabaaaaaaaaaaaa |
1m7b_A_173 | 1m7b | A | 173 | 194 | TYIECSALQSENSVRDIFHVAT | EEEE-BTTTBHHHHHHHHHHHH | bbbbbbaaabaaaaaaaaaaaa |
1qoi_A_22 | 1qoi | A | 27 | 48 | MKIELFADVVPKTAENFRQFCT | EEEEE-TTT-HHHHHHHHHHHH | bbbxbxaaabaaaaaaaaaaaa |
2cpl_*_15 | 2cpl | - | 20 | 41 | VSFELFADKVPKTAENFRALST | EEEEE-TTT-HHHHHHHHHHHH | bbbxbxaaabaaaaaaaaaaaa |
2rmc_A_49 | 2rmc | A | 54 | 75 | IVIGLFGNVVPKTVENFVALAT | EEEEE-TTTSHHHHHHHHHHHH | bbbxbxaaabaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1m7b_A_173 | 1m7b | A | GTPGUANOSINE-5'-TRIPHOSPHATE | C - 177 |
1m7b_A_173 | 1m7b | A | GTPGUANOSINE-5'-TRIPHOSPHATE | S - 178 |
1m7b_A_173 | 1m7b | A | GTPGUANOSINE-5'-TRIPHOSPHATE | A - 179 |
1m7b_A_173 | 1m7b | A | GTPGUANOSINE-5'-TRIPHOSPHATE | L - 180 |
1m7b_A_173 | 1m7b | A | GTPGUANOSINE-5'-TRIPHOSPHATE | Q - 181 |
Clusters included in this Subclass |
CLUSTER: EH.5.46 |