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Information on SUBCLASS 4.31.1
Subclass Accession number: 325
Subclass: 4.31.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>75 %)  1 (>75 %)  1.1 (>75 %)  1.1.1 (>75 %)  1.1.1.25
GO : GO:0004601 (>50 %)  GO:0004764 (>75 %)  GO:0016614 (>75 %)  GO:0016616 (>75 %)  GO:0016684 (>50 %)  
SCOP : 53222 (>50 %)  53223 (>50 %)  53473 (>50 %)  53474 (>50 %)  53531 (>50 %)  82336 (>50 %)  
 Number of loops: 6

Average sequence ID (%) : 8.9 +/- 11.6
Average RMSD (Å) : 0.950 +/- 0.207

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: pXXXXXhh
(φψ)-conformation: aagpapbb
Pattern: [ampt][aekqs][agmv]x[gnqs][ACLMV][aklm][DKRS]x[al][ARST][ers][ansv][EGK]x[dkpst][dtv][ilv][CFLTVY][IKMTV][FGILM]
Conservation:-0.405-0.141-0.274-2.0330.1770.762-0.8841.682-1.4380.9130.9230.481-0.5281.471-1.100-0.649-0.6081.651-0.3100.365-0.054
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b37_A_141b37   A1434MSGISAAKRLSEAGITDLLILHHHHHHHHHHHHTT---EEEEaaaaaaaaaaaaavxaxbbbb
1h7w_A_1971h7w   A197217PASISCASFLARLGYSDITIFHHHHHHHHHHHHHT---EEEEaaaaaaaaaaaaagxabbbbx
1itz_A_4511itz   A452472DYMRGAMRISALSEAGVIYVMHHHHHHHHHHHHHT---EEEEaaaaaaaaaaaaavbaxbxxb
1mbx_C_781mbx   C83103TKVAMVNKYARENEHPLLCTLHHHHHHHHHHHHTT---EEEEaaaaaaaaaaaaalbaxbbbb
1qmg_A_1361qmg   A139159AQAQNLKDSLTEAKSDVVVKIHHHHHHHHHHHHTT---EEEEaaaaaaaaaaaaavxaxxbbx
1usg_A_2031usg   A204224PEMGQMLRQARSVGLKTQFMGHHHHHHHHHHHHTT---EEEEaaaaaaaaaaaaavxapxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b37_A_141b37   A     FADFLAVIN-ADENINE DINUCLEOTIDE M - 14
1b37_A_141b37   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 15
1b37_A_141b37   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 16
1b37_A_141b37   A     FADFLAVIN-ADENINE DINUCLEOTIDE L - 34
1h7w_A_1971h7w   A     FADFLAVIN-ADENINE DINUCLEOTIDE P - 197
1h7w_A_1971h7w   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 198
1h7w_A_1971h7w   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 199
1h7w_A_1971h7w   A     FADFLAVIN-ADENINE DINUCLEOTIDE F - 217
1h7w_A_1971h7w   A     FADFLAVIN-ADENINE DINUCLEOTIDE E - 218
1itz_A_4511itz   A     TPPTHIAMINE DIPHOSPHATE Y - 453
1mbx_C_781mbx   C     GOLGLYCEROL A - 78
1mbx_C_781mbx   C     GOLGLYCEROL E - 79
1mbx_C_781mbx   C     GOLGLYCEROL A - 81
1mbx_C_781mbx   C     GOLGLYCEROL E - 82
1mbx_C_781mbx   C     GOLGLYCEROL L - 103
1qmg_A_1361qmg   A     DMV2,3-DIHYDROXY-VALERIANIC ACID Q - 136
1qmg_A_1361qmg   A     APX2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHORIBOSE Q - 136
1qmg_A_1361qmg   A     APX2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHORIBOSE A - 137
1qmg_A_1361qmg   A     APX2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHORIBOSE P - 138
1qmg_A_1361qmg   A     APX2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHORIBOSE Q - 140
1qmg_A_1361qmg   A     APX2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHORIBOSE L - 161
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1h7w_A_1971h7w   A AC6FAD BINDING SITE FOR CHAIN AP - 197
1h7w_A_1971h7w   A AC6FAD BINDING SITE FOR CHAIN AA - 198
1h7w_A_1971h7w   A AC6FAD BINDING SITE FOR CHAIN AE - 218

Clusters included in this Subclass
CLUSTER: HE.4.148
CLUSTER: HE.5.114
CLUSTER: HE.6.88