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Information on SUBCLASS 5.27.1
Subclass Accession number: 3262
Subclass: 5.27.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 9

Average sequence ID (%) : 22.8 +/- 27.4
Average RMSD (Å) : 0.956 +/- 0.332

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: hXhXXpXhp
(φψ)-conformation: bbppappaa
Pattern: [giklv]x[cgil][hs][AIPTV][GPT][gil][DERY][DPST][agivwy][DET][dekq][ilmt][ilvy][adsv][dpsv][AFLV][dekq]
Conservation:-1.292-0.525-1.5020.1310.1920.389-1.0430.9240.779-1.2772.3860.843-0.0800.199-0.624-0.8310.6420.689
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cl1_A_3701cl1   A371388IRLHIGLEDVDDLIADLDEEEE--SS-HHHHHHHHHbbbbxxaxxaaaaaaaaa
1cs1_A_3591cs1   A360377LRISTGIEDGEDLIADLEEEEE--SS-HHHHHHHHHbbbbxxaxxaaaaaaaaa
1e5e_A_3711e5e   A372389IRLSVGIEDADELIADFKEEEE--SS-HHHHHHHHHbbbbxbaxxaaaaaaaaa
1f07_A_21f07   A421GIEFVPNEPIEKIVKLVKEEEE-SSS-HHHHHHHHHbbbbbxabpaaaaaaaaa
1gc0_A_3731gc0   A374391VRLSVGLEDIDDLLADVQEEEE--SS-HHHHHHHHHbbbbxxaxxaaaaaaaaa
1ibj_A_4391ibj   A439456VRISAGIEDVDDLISDLDEEEE--SS-HHHHHHHHHbbbbxbaxxaaaaaaaaa
1m4j_A_371m4j   A4057GSCSPPSDSWEQDYDSFVEEEE---S-HHHHHHHHHabbbwxabxaaaaaaaaa
1qyi_A_2331qyi   A233250ELGIATGRPYTETVVPFEEEEEE-SS-HHHHHHHHHxxbbbbaxxaaaaaaaaa
1rql_A_1211rql   A121138KIGSTTGYTREMMDIVAKEEEE--SS-HHHHHHHHHxbbbbbaxxaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cl1_A_3701cl1   A     LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) R - 372
1cl1_A_3701cl1   A     BCTBICARBONATE ION R - 372
1e5e_A_3711e5e   A     PPJN-(HYDROXY{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL] PYRIDIN-4-YL}METHYL)NORVALINE R - 373
1f07_A_21f07   A     MPO3[N-MORPHOLINO]PROPANE SULFONIC ACID E - 6
1ibj_A_4391ibj   A     CO3CARBONATE ION R - 440
1qyi_A_2331qyi   A     MSESELENOMETHIONINE E - 233

Clusters included in this Subclass
CLUSTER: EH.4.101
CLUSTER: EH.5.88