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Information on SUBCLASS 5.41.1
Subclass Accession number: 3278
Subclass: 5.41.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 44.0 +/- 27.7
Average RMSD (Å) : 0.680 +/- 0.517

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: VXpXSXXXX
(φψ)-conformation: bppabapaa
Pattern: [AGR][IV][IV][kqr][DS][HP][S][KPS]x[NPV]x[lmw][AV][AF][IPV][LT][ILM][AET][HR][E]
Conservation:-0.5620.9860.975-0.6760.6420.8531.246-0.389-1.351-1.048-1.659-1.2870.069-0.368-0.4380.0620.367-0.6131.2901.902
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bud_A_1231bud   A124143GVIQDHSSVNRLVAITLAHEEEEE---SSHHHHHHHHHHHbbbxxabaxaaaaaaaaaaa
1kuf_A_1251kuf   A126145AVVKDHSSKVFMVAVTMTHEEEEE---S-HHHHHHHHHHHbbbxxabaxaaaaaaaaaaa
1mdb_A_2521mdb   A252271RVVLSPSPSPDDAFPLIEREEEEE-SSSSHHHHHHHHHHHbbbxxabapaaaaaaaaaaa
1nd1_A_1231nd1   A124143GVVRDHSKNNLWVAVTMAHEEEEE---SSHHHHHHHHHHHbbbxxabaxaaaaaaaaaaa
4aig_*_1234aig   -124143GIVKDHSPINLLVAVTMAHEEEEE---S-HHHHHHHHHHHbbbxxabaxaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bud_A_1231bud   A     ZN3ZINC ION, 1 WATER COORDINATED H - 142
1bud_A_1231bud   A     ZN3ZINC ION, 1 WATER COORDINATED E - 143
1bud_A_1231bud   A     ZN3ZINC ION, 1 WATER COORDINATED H - 146
1kuf_A_1251kuf   A     CDCADMIUM ION H - 131
1kuf_A_1251kuf   A     CDCADMIUM ION S - 132
1kuf_A_1251kuf   A     CDCADMIUM ION M - 137
1kuf_A_1251kuf   A     CDCADMIUM ION H - 144
1kuf_A_1251kuf   A     CDCADMIUM ION E - 145
1kuf_A_1251kuf   A     CDCADMIUM ION H - 148
1nd1_A_1231nd1   A     ZNZINC ION H - 142
1nd1_A_1231nd1   A     ZNZINC ION E - 143
1nd1_A_1231nd1   A     ZNZINC ION H - 146
4aig_*_1234aig   *     FLXN-[(FURAN-2-YL)CARBONYL]-(S)-LEUCYL-(R)-[1-AMINO-2(1H-INDOL-3-YL)ETHYL]-PHOSPHONIC ACID H - 129
4aig_*_1234aig   *     FLXN-[(FURAN-2-YL)CARBONYL]-(S)-LEUCYL-(R)-[1-AMINO-2(1H-INDOL-3-YL)ETHYL]-PHOSPHONIC ACID L - 135
4aig_*_1234aig   *     FLXN-[(FURAN-2-YL)CARBONYL]-(S)-LEUCYL-(R)-[1-AMINO-2(1H-INDOL-3-YL)ETHYL]-PHOSPHONIC ACID V - 138
4aig_*_1234aig   *     FLXN-[(FURAN-2-YL)CARBONYL]-(S)-LEUCYL-(R)-[1-AMINO-2(1H-INDOL-3-YL)ETHYL]-PHOSPHONIC ACID T - 139
4aig_*_1234aig   *     FLXN-[(FURAN-2-YL)CARBONYL]-(S)-LEUCYL-(R)-[1-AMINO-2(1H-INDOL-3-YL)ETHYL]-PHOSPHONIC ACID H - 142
4aig_*_1234aig   *     FLXN-[(FURAN-2-YL)CARBONYL]-(S)-LEUCYL-(R)-[1-AMINO-2(1H-INDOL-3-YL)ETHYL]-PHOSPHONIC ACID E - 143
4aig_*_1234aig   *     FLXN-[(FURAN-2-YL)CARBONYL]-(S)-LEUCYL-(R)-[1-AMINO-2(1H-INDOL-3-YL)ETHYL]-PHOSPHONIC ACID H - 146

Clusters included in this Subclass
CLUSTER: EH.6.113