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Information on SUBCLASS 5.80.1
Subclass Accession number: 3317
Subclass: 5.80.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 3.2 (>75 %)  3.2.1 (>75 %)  
GO : GO:0004553 (>75 %)  GO:0016798 (>75 %)  
SCOP : 51445 (>75 %)  51521 (>75 %)  
 Number of loops: 2

Average sequence ID (%) : 18.2 +/- 0.0
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: hPYcXpcXX
(φψ)-conformation: bpabaabaa
Pattern: [FK][LY][P][Y][DN][DP][ET][DN][PR]x[DS][IV][AR][A][AT][E]x[EM][DK]x[FI][FH]
Conservation:-0.987-0.3842.4812.4810.370-0.082-0.5350.370-0.535-0.535-0.2330.370-0.6850.672-0.3841.275-0.987-0.836-0.384-1.289-0.2330.069
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e4m_M_2551e4m   M261282FLPYNDTDRHSIAATERMKEFFEEESSTT-HHHHHHHHHHHHHHbbxabaabaaaaaaaaaaaaaa
1pbg_A_2211pbg   A221242KYPYDPENPADVRAAELEDIIHEEESSTT-HHHHHHHHHHHHHHbbxabaabaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e4m_M_2551e4m   M     NAGN-ACETYL-D-GLUCOSAMINE Y - 264
1e4m_M_2551e4m   M     NAGN-ACETYL-D-GLUCOSAMINE N - 265
1e4m_M_2551e4m   M     FUCFUCOSE N - 265
1e4m_M_2551e4m   M     NAGN-ACETYL-D-GLUCOSAMINE D - 266
1e4m_M_2551e4m   M     NAGN-ACETYL-D-GLUCOSAMINE T - 267
1e4m_M_2551e4m   M     GOLGLYCEROL T - 267
1e4m_M_2551e4m   M     NAGN-ACETYL-D-GLUCOSAMINE D - 268
1e4m_M_2551e4m   M     NAGN-ACETYL-D-GLUCOSAMINE R - 269
1e4m_M_2551e4m   M     GOLGLYCEROL R - 269
1e4m_M_2551e4m   M     GOLGLYCEROL H - 270

Clusters included in this Subclass
CLUSTER: EH.4.361