Information on SUBCLASS 6.4.2 |
Subclass Accession number: 3331
Subclass: 6.4.2 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 10.3 +/- 11.1 Average RMSD (Å) : 0.883 +/- 0.172 Consensus geometry
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Consensus Sequence: | XhhXXXXXXp |
(φψ)-conformation: | bpppaappaa |
Pattern: | x | [IPTV] | [alvy] | [dnpr] | [adk] | x | [fkmtv] | [NPS] | x | [AENR] | [dens] | x | [iklv] |
Conservation: | -0.514 | 1.332 | -0.686 | -0.848 | -0.287 | -1.339 | -0.503 | 2.118 | -0.174 | 1.220 | 0.398 | -0.693 | -0.024 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b16_A_56 | 1b16 | A | 60 | 72 | HTYDVTVPVAESK | EE--TTS-HHHHH | bxbbaaxxaaaaa |
1jqb_A_1134 | 1jqb | A | 1134 | 1146 | AILPKDMPLENAV | EE--TTS-HHHHH | bxxpaaxpaaaaa |
1lci_*_101 | 1lci | - | 103 | 115 | APANDIYNERELL | EE--TT--HHHHH | bwbpaapxaaaaa |
1mbx_C_27 | 1mbx | C | 32 | 44 | LVNDDYTPMEFVI | EE--SSS-HHHHH | bbxbaaxxaaaaa |
1ry2_A_215 | 1ry2 | A | 217 | 229 | SVVFAGFSSNSLR | EE--TTS-HHHHH | bxbpaappaaaaa |
1udv_A_7 | 1udv | A | 8 | 20 | IVVRKTKNVEDHV | EE--SSS-HHHHH | bxxxaabxaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1b16_A_56 | 1b16 | A | NAQNICOTINAMIDE ADENINE DINUCLEOTIDE 3-PENTANONE ADDUCT | Y - 62 |
1b16_A_56 | 1b16 | A | NAQNICOTINAMIDE ADENINE DINUCLEOTIDE 3-PENTANONE ADDUCT | D - 63 |
1b16_A_56 | 1b16 | A | NAQNICOTINAMIDE ADENINE DINUCLEOTIDE 3-PENTANONE ADDUCT | V - 64 |
1b16_A_56 | 1b16 | A | NAQNICOTINAMIDE ADENINE DINUCLEOTIDE 3-PENTANONE ADDUCT | T - 65 |
1mbx_C_27 | 1mbx | C | GOLGLYCEROL | Y - 28 |
1udv_A_7 | 1udv | A | ZNZINC ION | K - 14 |
1udv_A_7 | 1udv | A | ZNZINC ION | D - 18 |
1udv_A_7 | 1udv | A | ZNZINC ION | H - 19 |
1udv_A_7 | 1udv | A | ZNZINC ION | D - 22 |
Clusters included in this Subclass |
CLUSTER: EH.6.117 |
CLUSTER: EH.7.68 |