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Information on SUBCLASS 4.41.1
Subclass Accession number: 335
Subclass: 4.41.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0008483 (>75 %)  GO:0016769 (>75 %)  GO:0016846 (>75 %)  
SCOP : 53382 (>50 %)  53383 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 8.3 +/- 11.6
Average RMSD (Å) : 1.100 +/- 0.361

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XXXpXXXh
(φψ)-conformation: aapababb
Pattern: [ILT][AEF][EKL]x[AKT][KS][FTV][ADK][GR][IPV]x[GV]
Conservation:0.501-1.213-0.699-0.871-0.0142.361-0.185-0.5281.2730.158-0.699-0.083
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1js1_X_1481js1   X158169IEEYKKTARPKVHHHH-SSSS-EEaaaaxababxxb
1qdm_A_1161qdm   A116127TFLVAKFDGILGHHHH-SSSEEEEaaaapababbbx
1qis_A_1071qis   A119130LAKNTSVKRVWVHHHHSS--EEEEaaaabaxabbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1qis_A_1071qis   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 107
1qis_A_1071qis   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 108
1qis_A_1071qis   A     PLPPYRIDOXAL-5'-PHOSPHATE T - 109
1qis_A_1071qis   A     MAEMALEIC ACID T - 109
1qis_A_1071qis   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 110
1qis_A_1071qis   A     PLPPYRIDOXAL-5'-PHOSPHATE L - 112

Clusters included in this Subclass
CLUSTER: HE.5.152