ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 6.44.1

Subclass Accession number: 3384
Subclass: 6.44.1

Type: EH beta-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Number of loops: 4

Average sequence ID (%) : 10.0 +/- 10.8
Average RMSD (Å) : 0.850 +/- 0.129

Consensus geometry

d (Å): 13

delta (°): 45-90

theta (°): 135-180

rho (°): 270-315

Consensus Sequence:	hXXXhXpchp
(φψ)-conformation:	bpaaabapaa

Pattern:	[FKTV]	[APV]	x	[FIY]	[AN]	x	[AEFK]	x	x	[DRS]	[DNS]	[FIW]	[HRST]	x	[IL]	x	x	x	x	[AEK]
Conservation:	-0.786	0.209	-0.383	1.183	0.664	-0.417	-0.786	-0.651	-0.786	0.237	1.875	0.630	0.020	-0.517	2.563	-1.256	-1.189	-0.450	-0.584	0.423

Loops included in this Subclass

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1fnn_A_74	1fnn	A	MGMAGNESIUM ION	Y - 77
1knw_A_48	1knw	A	PLPPYRIDOXAL-5'-PHOSPHATE	A - 52
1knw_A_48	1knw	A	PLPPYRIDOXAL-5'-PHOSPHATE	K - 54
1knw_A_48	1knw	A	MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID	K - 54
1knw_A_48	1knw	A	PLPPYRIDOXAL-5'-PHOSPHATE	A - 55
2tod_A_62	2tod	A	PLPPYRIDOXAL-5'-PHOSPHATE	A - 67
2tod_A_62	2tod	A	DMOALPHA-DIFLUOROMETHYLORNITHINE	A - 67
2tod_A_62	2tod	A	DMOALPHA-DIFLUOROMETHYLORNITHINE	A - 69
2tod_A_62	2tod	A	PLPPYRIDOXAL-5'-PHOSPHATE	C - 70

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
2tod_A_62	2tod	A	CAACATALYTIC SITE	A - 69

Clusters included in this Subclass