Information on SUBCLASS 6.62.1 |
Subclass Accession number: 3402
Subclass: 6.62.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0008460 (>50 %) GO:0016829 (>50 %) GO:0016835 (>50 %) GO:0016836 (>50 %) SCOP : 51734 (>75 %) 51735 (>75 %) 51751 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 45.8 +/- 12.4 Average RMSD (Å) : 0.400 +/- 0.173 Consensus geometry
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Consensus Sequence: | VphAAppXXD |
(φψ)-conformation: | bbapbpabaa |
Pattern: | [AV] | [I] | [V] | [HN] | [AFY] | [A] | [A] | [EH] | [ST] | x | [NV] | [D] | [KNR] | [AS] | x | [ANS] |
Conservation: | -0.586 | 0.795 | 0.795 | 0.933 | -0.848 | 0.795 | 0.795 | 0.164 | -0.110 | -0.363 | -1.320 | 2.202 | -0.457 | -0.241 | -1.630 | -0.926 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1kbz_A_57 | 1kbz | A | 57 | 72 | VIVNAAAHTAVDKAES | EEEE------HHHHHH | bbbxaxbxaxaaaaaa |
1oc2_A_78 | 1oc2 | A | 78 | 93 | AIVHYAAESHNDNSLN | EEEE--S---HHHHHH | bbbbaxbxabaaaaaa |
1r6d_A_79 | 1r6d | A | 79 | 94 | AIVHFAAESHVDRSIA | EEEE--S---HHHHHH | bbbbapbxabaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1oc2_A_78 | 1oc2 | A | AC1TDX BINDING SITE FOR CHAIN A | S - 86 |
1oc2_A_78 | 1oc2 | A | AC1TDX BINDING SITE FOR CHAIN A | H - 87 |
1oc2_A_78 | 1oc2 | A | AC1TDX BINDING SITE FOR CHAIN A | N - 88 |
Clusters included in this Subclass |
CLUSTER: EH.5.400 |