Information on SUBCLASS 6.64.1 |
Subclass Accession number: 3404
Subclass: 6.64.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0016829 (>50 %) GO:0016835 (>50 %) GO:0016836 (>50 %) SCOP : 52953 (>50 %) 52968 (>50 %) 52969 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 24.6 +/- 20.7 Average RMSD (Å) : 1.133 +/- 0.513 Consensus geometry
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Consensus Sequence: | XXhXpXScXX |
(φψ)-conformation: | bbpaabapaa |
Pattern: | [HK] | [AC] | [R] | [VY] | [HIV] | x | [CFI] | [FKL] | [DKR] | x | [S] | [DN] | [TV] | [AST] | [EF] | x | [AN] | x | x | [AGM] | [ANT] | [NRT] | [L] |
Conservation: | 0.592 | 0.760 | 2.478 | 0.143 | -0.629 | -0.671 | -0.362 | -1.072 | -0.274 | -0.717 | 1.679 | 1.383 | 0.283 | -0.007 | -0.251 | -0.806 | -0.355 | -1.428 | -0.717 | -0.895 | -0.540 | -0.274 | 1.679 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1apa_*_88 | 1apa | - | 88 | 110 | KCRYHIFKDISNTTERNDVMTTL | EEEEEEBTT---HHHHHHHHHHH | bxbxbbxaaxapaaaaaaaaaaa |
1eex_B_101 | 1eex | B | 101 | 123 | KARVIRCFKSSDVAFVAVEGNRL | EEEEEE--S--SHHHHHHHHHHH | xbbbbbbaabaxaaaaaaaaaaa |
1iwp_B_68 | 1iwp | B | 68 | 90 | HARVVRILRTSDVSFMAWDAANL | EEEEEE--S---HHHHHHHHHHH | xxbxbbxaabaxaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1eex_B_101 | 1eex | B | COYCO-(ADENIN-9-YL-PENTYL)-COBALAMIN | D - 112 |
1eex_B_101 | 1eex | B | COYCO-(ADENIN-9-YL-PENTYL)-COBALAMIN | V - 113 |
1eex_B_101 | 1eex | B | COYCO-(ADENIN-9-YL-PENTYL)-COBALAMIN | A - 114 |
1eex_B_101 | 1eex | B | COYCO-(ADENIN-9-YL-PENTYL)-COBALAMIN | F - 115 |
1iwp_B_68 | 1iwp | B | B12COBALAMIN | D - 79 |
1iwp_B_68 | 1iwp | B | B12COBALAMIN | V - 80 |
1iwp_B_68 | 1iwp | B | B12COBALAMIN | S - 81 |
1iwp_B_68 | 1iwp | B | B12COBALAMIN | F - 82 |
Clusters included in this Subclass |
CLUSTER: EH.5.380 |