Information on SUBCLASS 7.18.1 |
Subclass Accession number: 3438
Subclass: 7.18.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 23.6 +/- 22.6 Average RMSD (Å) : 1.075 +/- 0.377 Consensus geometry
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Consensus Sequence: | hcphDXhppXX |
(φψ)-conformation: | pplaaapabaa |
Pattern: | [GIV] | [LVY] | x | [ILV] | [DN] | [HK] | [ACIV] | [D] | x | [LV] | [DQY] | [DE] | [EKPS] | [AE] | x | [LVY] | x | x | x | [EL] | x | x | [ILV] | x |
Conservation: | -0.481 | -0.120 | -0.759 | 0.714 | 1.458 | 0.706 | -0.221 | 2.883 | -0.884 | 0.703 | -0.195 | 1.720 | -0.387 | 0.505 | -1.008 | -0.085 | -0.807 | -1.090 | -0.926 | -0.591 | -0.470 | -0.650 | 0.798 | -0.812 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d2e_A_176 | 1d2e | A | 177 | 200 | VVYVNKADAVQDSEMVELVELEIR | EEEEE-GGG-S-HHHHHHHHHHHH | bbbxxvaaaxabaaaaaaaaaaaa |
1efc_A_130 | 1efc | A | 131 | 154 | IVFLNKCDMVDDEELLELVEMEVR | EEEEE-TTS---HHHHHHHHHHHH | bbbxxlaaabapaaaaaaaaaaaa |
1ega_A_119 | 1ega | A | 120 | 143 | ILAVNKVDNVQEKADLLPHLQFLA | EEEEESTTT---HHHHHHHHHHHH | xxbxxlaaaxabaaaaaaaaaaaa |
1iv8_A_224 | 1iv8 | A | 224 | 247 | GYRIDHIDGLYDPEKYINDLRSII | EEEETTGGG-S-HHHHHHHHHHHH | bbbxxlaaaxabaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1d2e_A_176 | 1d2e | A | GDPGUANOSINE-5'-DIPHOSPHATE | Y - 179 |
1d2e_A_176 | 1d2e | A | GDPGUANOSINE-5'-DIPHOSPHATE | N - 181 |
1d2e_A_176 | 1d2e | A | GDPGUANOSINE-5'-DIPHOSPHATE | K - 182 |
1d2e_A_176 | 1d2e | A | GDPGUANOSINE-5'-DIPHOSPHATE | A - 183 |
1d2e_A_176 | 1d2e | A | GDPGUANOSINE-5'-DIPHOSPHATE | D - 184 |
1d2e_A_176 | 1d2e | A | GDPGUANOSINE-5'-DIPHOSPHATE | A - 185 |
1efc_A_130 | 1efc | A | GDPGUANOSINE-5'-DIPHOSPHATE | F - 133 |
1efc_A_130 | 1efc | A | GDPGUANOSINE-5'-DIPHOSPHATE | N - 135 |
1efc_A_130 | 1efc | A | GDPGUANOSINE-5'-DIPHOSPHATE | K - 136 |
1efc_A_130 | 1efc | A | GDPGUANOSINE-5'-DIPHOSPHATE | C - 137 |
1efc_A_130 | 1efc | A | GDPGUANOSINE-5'-DIPHOSPHATE | D - 138 |
1efc_A_130 | 1efc | A | GDPGUANOSINE-5'-DIPHOSPHATE | M - 139 |
1iv8_A_224 | 1iv8 | A | MLYN-DIMETHYL-LYSINE | G - 224 |
1iv8_A_224 | 1iv8 | A | MLYN-DIMETHYL-LYSINE | Y - 225 |
1iv8_A_224 | 1iv8 | A | MLYN-DIMETHYL-LYSINE | K - 238 |
1iv8_A_224 | 1iv8 | A | MLYN-DIMETHYL-LYSINE | R - 244 |
1iv8_A_224 | 1iv8 | A | MLYN-DIMETHYL-LYSINE | I - 247 |
Clusters included in this Subclass |
CLUSTER: EH.8.21 |