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Information on SUBCLASS 8.2.1
Subclass Accession number: 3476
Subclass: 8.2.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 47.1 +/- 28.1
Average RMSD (Å) : 0.360 +/- 0.182

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: cTHhXXXXLPXp
(φψ)-conformation: bbappaaappaa
Pattern: [IL][ILMV][KN][ST][H][IL][PS]x[AEKL]x[L][P][AEQ][ST][FLV]x[DES]
Conservation:0.153-0.2120.0290.2242.5080.1520.065-1.185-1.196-0.7350.5952.030-0.572-0.013-0.566-0.996-0.282
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aqu_A_1041aqu   A104120IVKTHLPPKLLPASFWEEEEE---GGGS-HHHHHbbxbaxxaaaxpaaaaa
1cjm_A_1041cjm   A104120LIKSHLPLALLPQTLLDEEEE---GGGS-HHHHHbbbbapxaaaxpaaaaa
1g3m_A_1031g3m   A103119IVKTHLPPELLPASFWEEEEE---GGGS-HHHHHbbxbaxxaaaxpaaaaa
1ls6_A_1041ls6   A104120LLKTHLPLALLPQTLLDEEEE---TTTS-HHHHHbbbbaxxaaaxpaaaaa
1q44_A_1361q44   A136152LMNTHISHLSLPESVKSEEEE---GGGS-HHHHHxbbbaxpaaaxwaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aqu_A_1041aqu   A     ESTESTRADIOL K - 106
1aqu_A_1041aqu   A     A3PADENOSINE-3'-5'-DIPHOSPHATE H - 108
1aqu_A_1041aqu   A     ESTESTRADIOL H - 108
1g3m_A_1031g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE K - 105
1g3m_A_1031g3m   A     PCQ3,5,3',5'-TETRACHLORO-BIPHENYL-4,4'-DIOL K - 105
1g3m_A_1031g3m   A     A3PADENOSINE-3'-5'-DIPHOSPHATE H - 107
1g3m_A_1031g3m   A     PCQ3,5,3',5'-TETRACHLORO-BIPHENYL-4,4'-DIOL H - 107
1g3m_A_1031g3m   A     EDO1,2-ETHANEDIOL E - 111
1ls6_A_1041ls6   A     A3PADENOSINE-3'-5'-DIPHOSPHATE K - 106
1ls6_A_1041ls6   A     NPOP-NITROPHENOL K - 106
1ls6_A_1041ls6   A     NPOP-NITROPHENOL H - 108
1q44_A_1361q44   A     MLAMALONIC ACID H - 140
1q44_A_1361q44   A     MLAMALONIC ACID I - 141

Clusters included in this Subclass
CLUSTER: EH.7.60