ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 8.3.1

Subclass Accession number: 3478
Subclass: 8.3.1

Type: EH beta-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Number of loops: 8

Average sequence ID (%) : 41.5 +/- 24.5
Average RMSD (Å) : 0.350 +/- 0.141

Consensus geometry

d (Å): 25

delta (°): 45-90

theta (°): 45-90

rho (°): 0-45

Consensus Sequence:	pXXQGhppLXXp
(φψ)-conformation:	bpaaepbbbpaa

Pattern:	x	[fhv]	[FWY]	[CV]	[KQR]	[FVY]	[H]	[FIWY]	[hkr]	[CPST]	x	[AQ]	[G]	[IKV]	[hk]	[HNS]	[L]	x	x	[DEKQ]	[el]	[AV]	[AEQT]	[AEKQR]	[ILV]	[aqrst]
Conservation:	-1.241	-0.783	0.968	0.171	0.433	0.456	3.043	0.168	-0.598	-0.555	-1.098	0.318	1.997	-0.240	-0.258	0.466	0.952	-0.985	-1.533	0.029	-0.232	0.221	-0.674	-0.370	0.290	-0.943

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a4e_A_226	1a4e	A	226	251	WHYVQVHIKTDQGIKNLTIEEATKIA	EEEEEEEEEESS---B--HHHHHHHH	bbxbbbbbxxaaexbbbxaaaaaaaa
1dgf_A_229	1dgf	A	229	254	AVYCKFHYKTDQGIKNLSVEDAARLS	EEEEEEEEEETT---B--HHHHHHHH	bbxbbbbbxxaaexbbbxaaaaaaaa
1e93_A_208	1e93	A	208	233	RFWVKFHFRCQQGIKNLMDDEAEALV	EEEEEEEEEETT---B--HHHHHHHH	bbxbbbbbxxaaexbbbxaaaaaaaa
1gwe_A_214	1gwe	A	214	239	KHWVKYHFISQQGVHNLSNDEATKIA	EEEEEEEEEETT---B--HHHHHHHH	bbxbbbbbxxaaebbbbxaaaaaaaa
1m7s_A_231	1m7s	A	231	256	VHYVKFHWKSLQGIKNLDPKEVAQVQ	EEEEEEEEEETT---B--HHHHHHHH	bbxbbbbxxxaaebbbxxaaaaaaaa
1p80_A_286	1p80	A	286	311	ATFVRFHWKPLAGKASLVWDEAQKLT	EEEEEEEEEETT---B--HHHHHHHH	bbxbbxbbbxaaexbbxbaaaaaaaa
1qwl_A_210	1qwl	A	210	235	RFWVKFHFHTMQGVKHLTNEEAAEIR	EEEEEEEEEETT---B--HHHHHHHH	bbxbbbbbxxaaexbbbxaaaaaaaa
1si8_A_208	1si8	A	208	233	VFFVKYHFKTNQGIKNLESQLAEEIA	EEEEEEEEEETT---B--HHHHHHHH	bbxbbxbbxxaaexbbbxaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1dgf_A_229	1dgf	A	NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE	H - 235
1dgf_A_229	1dgf	A	NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE	K - 237
1dgf_A_229	1dgf	A	NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE	I - 242

Clusters included in this Subclass