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Information on SUBCLASS 5.1.2
Subclass Accession number: 348
Subclass: 5.1.2 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0005489 (>50 %)  
SCOP : 50412 (>75 %)  63380 (>75 %)  63381 (>75 %)  
 Number of loops: 8

Average sequence ID (%) : 13.7 +/- 13.4
Average RMSD (Å) : 0.950 +/- 0.262

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXhXppXXh
(φψ)-conformation: aappaapbb
Pattern: [adgkn][ADEQ]xxxx[ILT]x[aeknt][fklmtv][aelm][APQST][DEKP][dehnst][dtv]x[FIV][alv]x
Conservation:-0.6771.049-0.765-1.083-0.252-0.8561.747-1.313-0.570-0.524-0.2620.3861.491-0.142-0.012-0.4892.3830.201-0.311
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bs0_A_1081bs0   A110128AANQAVIAAMMAKEDRIAAHHHHHHHHHH--TT-EEEEaaaaaaaaaabbaaxbbbb
1f14_A_1121f14   A116134NELFKRLDKFAAEHTIFASHHHHHHHHHHS-TT-EEEEaaaaaaaaaapxaapbbbb
1g62_A_781g62   A7896DQELQHLRNSLPDSVKIQRHHHHHHHHHHS-TTSEEEEaaaaaaaaaaxpaabxbbx
1jtk_A_871jtk   A87105GACRQVISELCTKDVIVVLHHHHHHHHHHS-TT-EEEEaaaaaaaaaabxaapxbbb
1qde_A_1801qde   A180198KEQIYQIFTLLPPTTQVVLHHHHHHHHHHS-TT-EEEEaaaaaaaaaaxpaaxxbbb
1vec_A_2461vec   A246264VQIMEDIILTLPKNRQILLHHHHHHHHHHS-TT-EEEEaaaaaaaaaaxwaaxxbbb
2trc_P_1202trc   P120138GEQFLETIEKEQKVTTIVVHHHHHHHHHHS-TT-EEEEaaaaaaaaaaxpaaxxbbb
7mdh_A_1407mdh   A152170ADQGKALNAVASKNVKVLVHHHHHHHHHHS-TT-EEEEaaaaaaaaaaxpaaxxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jtk_A_871jtk   A     ZNZINC ION G - 87
1jtk_A_871jtk   A     THUTETRAHYDRODEOXYURIDINE G - 87
1jtk_A_871jtk   A     ZNZINC ION A - 88
1jtk_A_871jtk   A     ZNZINC ION C - 89
1jtk_A_871jtk   A     THUTETRAHYDRODEOXYURIDINE C - 89
1jtk_A_871jtk   A     ZNZINC ION R - 90
2trc_P_1202trc   P     MSESELENOMETHIONINE T - 134
2trc_P_1202trc   P     MSESELENOMETHIONINE T - 135
7mdh_A_1407mdh   A     ZNZINC ION V - 170

Clusters included in this Subclass
CLUSTER: HE.4.68
CLUSTER: HE.5.73