Information on SUBCLASS 12.3.1 |
Subclass Accession number: 3580
Subclass: 12.3.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 65.4 +/- 17.4 Average RMSD (Å) : 0.320 +/- 0.084 Consensus geometry
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Consensus Sequence: | hWXLXEFhphXpFEhQ |
(φψ)-conformation: | bpabaaaaaabbbpaa |
Pattern: | [EK] | [T] | [IV] | [W] | [MR] | [L] | [EP] | [E] | [F] | [AG] | [KQR] | [FL] | x | x | [F] | [DE] | [AP] | [Q] | [G] | [AG] | [L] | [AQ] | [N] | [I] | [A] | [ATV] | [DEG] | [K] | x | [N] | [L] | [DEG] | [IV] | [LM] | [KT] | [EK] | [R] |
Conservation: | -0.266 | 0.676 | -0.072 | 3.669 | -0.779 | 0.177 | -0.538 | 0.676 | 1.175 | -0.596 | -0.551 | -0.595 | -1.627 | -1.602 | 1.175 | 0.049 | -0.649 | 0.676 | 1.175 | -0.539 | 0.177 | -0.927 | 1.175 | 0.177 | 0.177 | -1.091 | -0.972 | 0.676 | -0.759 | 1.175 | 0.177 | -1.026 | -0.072 | -0.209 | -0.731 | -0.262 | 0.676 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fng_A_40 | 1fng | A | 40 | 76 | ETIWRLEEFAKFASFEAQGALANIAVDKANLDVMKER | EEEESSGGGGGT----HHHHHHHHHHHHHHHHHHHHH | bxbxabaaaaaabbbxaaaaaaaaaaaaaaaaaaaaa |
1fv1_A_40 | 1fv1 | A | 40 | 76 | ETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKR | EEEESSGGGGGT----HHHHHHHHHHHHHHHHHHHHH | bxbxabaaaaaabbbxaaaaaaaaaaaaaaaaaaaaa |
1iak_A_40 | 1iak | A | 40 | 76 | ETVWMLPEFAQLRRFEPQGGLQNIATGKHNLEILTKR | EEEESSGGGGGT----HHHHHHHHHHHHHHHHHHHHH | bxbxabaaaaaabbbxaaaaaaaaaaaaaaaaaaaaa |
1k2d_A_40 | 1k2d | A | 40 | 76 | ETIWMLPEFAQLRSFDPQGGLQNIATGKHNLGVLTKR | EEEESSGGGGGT----HHHHHHHHHHHHHHHHHHHHH | bxxxabaaaaaabbbxwaaaaaaaaaaaaaxGaaaaa |
2iad_A_40 | 2iad | A | 40 | 76 | KTVWRLPEFGQLILFEPQGGLQNIAAEKHNLGILTKR | EEEESSTTTTTT----THHHHHHHHHHHHHHHHHHHH | bxbxabaaaaaabbbxaaaaaaaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1iak_A_40 | 1iak | A | NAGN-ACETYL-D-GLUCOSAMINE | K - 75 |
1iak_A_40 | 1iak | A | NAGN-ACETYL-D-GLUCOSAMINE | R - 76 |
1iak_A_40 | 1iak | A | NAGN-ACETYL-D-GLUCOSAMINE | S - 77 |
Clusters included in this Subclass |
CLUSTER: EH.12.14 |