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Information on SUBCLASS 13.1.1
Subclass Accession number: 3588
Subclass: 13.1.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 45.1 +/- 27.4
Average RMSD (Å) : 0.470 +/- 0.263

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: LGhhhXphXhXXhXPhh
(φψ)-conformation: bpappaaappglpppaa
Pattern: [G][IV][LV][G][LM][AG][FWY][dkp][ADEST][il][AS]x[ADEGS][gkrs][asv][dtv][P][IPV][FVW][dy][EHKN][AILM]
Conservation:1.8710.6050.2521.8710.4150.2810.814-1.089-0.725-0.7160.055-0.723-0.755-1.153-0.639-0.8232.391-0.338-0.047-0.947-0.208-0.391
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1am5_*_1191am5   -119140GILGLAYPSIAAAGAVPVFDNMEEEE-S-GGG-GGG---HHHHHbbbxaxxaaaxxvvxxxaaaaa
1dpj_A_1191dpj   A119140GILGLGYDTISVDKVVPPFYNAEEEE-S-GGG-GGG---HHHHHbbbxaxxaaaxxvlxxxaaaaa
1hrn_A_1191hrn   A119140GVVGMGFIEQAIGRVTPIFDNIEEEE-S-GGG-GGG---HHHHHbbbxaxxaaaxxvUpxxaaaaa
1lf2_A_1221lf2   A122143GILGLGWKDLSIGSVDPIVVELEEEE-S-GGGSTT----HHHHHbbbxaxxaaaxxvlxxwaaaaa
1pso_E_1191pso   E119140GILGLAYPSISSSGATPVFDNIEEEE-S-GGG-GGG---HHHHHbbbxaxxaaaxxllxpxaaaaa
1qdm_A_1241qdm   A124145GILGLGFKEISVGKAVPVWYKMEEEE-S-GGG-GGG---HHHHHbbbxaxxaaaxxvlxxpaaaaa
1qs8_A_1221qs8   A122143GILGLGWKDLSIGSIDPIVVELEEEE-S-GGGSSS----HHHHHbbbxaxbaaaxbglbxpaaaaa
1smr_A_1191smr   A119140GVLGMGFPAQAVGGVTPVFDHIEEEE-S-GGG-GGG---HHHHHbbbxaxbaaaxxvlxpxaaaaa
3cms_*_1193cms   -119140GILGMAYPSLASEYSIPVFDNMEEEE-S-GGGS-TT---HHHHHbbbpaxxwaaxxpvxbpaaaaa
3psg_*_1193psg   -119140GILGLAYPSISASGATPVFDNLEEEE-S-GGG-GGG---HHHHHbbbxaxxaaaxxUlxxxaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dpj_A_1191dpj   A     MANALPHA-D-MANNOSE D - 126
1dpj_A_1191dpj   A     NAGN-ACETYL-D-GLUCOSAMINE V - 130
1dpj_A_1191dpj   A     NAGN-ACETYL-D-GLUCOSAMINE D - 131
1dpj_A_1191dpj   A     MANALPHA-D-MANNOSE K - 132
1dpj_A_1191dpj   A     NAGN-ACETYL-D-GLUCOSAMINE K - 132
1dpj_A_1191dpj   A     MANALPHA-D-MANNOSE V - 133
1dpj_A_1191dpj   A     NAGN-ACETYL-D-GLUCOSAMINE V - 133
1dpj_A_1191dpj   A     MANALPHA-D-MANNOSE V - 134
1dpj_A_1191dpj   A     NAGN-ACETYL-D-GLUCOSAMINE V - 134
1dpj_A_1191dpj   A     MANALPHA-D-MANNOSE P - 135
1dpj_A_1191dpj   A     MANALPHA-D-MANNOSE Y - 138
1dpj_A_1191dpj   A     MANALPHA-D-MANNOSE N - 139
1dpj_A_1191dpj   A     MANALPHA-D-MANNOSE I - 141
1dpj_A_1191dpj   A     MANALPHA-D-MANNOSE Q - 142
1hrn_A_1191hrn   A     CHA1-HYDROXY-2-AMINO-3-CYCLOHEXYLPROPANE G - 119
1hrn_A_1191hrn   A     CHA1-HYDROXY-2-AMINO-3-CYCLOHEXYLPROPANE V - 120
1hrn_A_1191hrn   A     IP31-HYDROXY-3-METHYLBUTANE Q - 128
1hrn_A_1191hrn   A     NAGN-ACETYL-D-GLUCOSAMINE G - 131
1lf2_A_1221lf2   A     R373-AMINO-N-{4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-1-ISOBUTYL-5-PHENYL-PENTYL}-BENZAMIDE I - 123
1lf2_A_1221lf2   A     R373-AMINO-N-{4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-1-ISOBUTYL-5-PHENYL-PENTYL}-BENZAMIDE L - 131
1lf2_A_1221lf2   A     R373-AMINO-N-{4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-1-ISOBUTYL-5-PHENYL-PENTYL}-BENZAMIDE S - 132
1lf2_A_1221lf2   A     R373-AMINO-N-{4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-1-ISOBUTYL-5-PHENYL-PENTYL}-BENZAMIDE I - 133
1pso_E_1191pso   E     STASTATINE I - 120
1pso_E_1191pso   E     STASTATINE I - 128
1pso_E_1191pso   E     STASTATINE S - 130
1qs8_A_1221qs8   A     STASTATINE I - 123
1qs8_A_1221qs8   A     STASTATINE L - 131
1qs8_A_1221qs8   A     STASTATINE I - 133
1qs8_A_1221qs8   A     STASTATINE G - 134
1qs8_A_1221qs8   A     STASTATINE S - 135
1smr_A_1191smr   A     LPLLEU-HYDROXYETHYLENE-LEU V - 120
1smr_A_1191smr   A     LPLLEU-HYDROXYETHYLENE-LEU Q - 128

Clusters included in this Subclass
CLUSTER: EH.12.1