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PDB code:

Information on SUBCLASS 13.1.1

Subclass Accession number: 3588 Subclass: 13.1.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 10 Average sequence ID (%) : 45.1 +/- 27.4 Average RMSD (Å) : 0.470 +/- 0.263 Consensus geometry d (Å): 7 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1am5_*_119	1am5	-	119	140	GILGLAYPSIAAAGAVPVFDNM	EEEE-S-GGG-GGG---HHHHH	bbbxaxxaaaxxvvxxxaaaaa
1dpj_A_119	1dpj	A	119	140	GILGLGYDTISVDKVVPPFYNA	EEEE-S-GGG-GGG---HHHHH	bbbxaxxaaaxxvlxxxaaaaa
1hrn_A_119	1hrn	A	119	140	GVVGMGFIEQAIGRVTPIFDNI	EEEE-S-GGG-GGG---HHHHH	bbbxaxxaaaxxvUpxxaaaaa
1lf2_A_122	1lf2	A	122	143	GILGLGWKDLSIGSVDPIVVEL	EEEE-S-GGGSTT----HHHHH	bbbxaxxaaaxxvlxxwaaaaa
1pso_E_119	1pso	E	119	140	GILGLAYPSISSSGATPVFDNI	EEEE-S-GGG-GGG---HHHHH	bbbxaxxaaaxxllxpxaaaaa
1qdm_A_124	1qdm	A	124	145	GILGLGFKEISVGKAVPVWYKM	EEEE-S-GGG-GGG---HHHHH	bbbxaxxaaaxxvlxxpaaaaa
1qs8_A_122	1qs8	A	122	143	GILGLGWKDLSIGSIDPIVVEL	EEEE-S-GGGSSS----HHHHH	bbbxaxbaaaxbglbxpaaaaa
1smr_A_119	1smr	A	119	140	GVLGMGFPAQAVGGVTPVFDHI	EEEE-S-GGG-GGG---HHHHH	bbbxaxbaaaxxvlxpxaaaaa
3cms_*_119	3cms	-	119	140	GILGMAYPSLASEYSIPVFDNM	EEEE-S-GGGS-TT---HHHHH	bbbpaxxwaaxxpvxbpaaaaa
3psg_*_119	3psg	-	119	140	GILGLAYPSISASGATPVFDNL	EEEE-S-GGG-GGG---HHHHH	bbbxaxxaaaxxUlxxxaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1dpj_A_119	1dpj	A	MANALPHA-D-MANNOSE	D - 126
1dpj_A_119	1dpj	A	NAGN-ACETYL-D-GLUCOSAMINE	V - 130
1dpj_A_119	1dpj	A	NAGN-ACETYL-D-GLUCOSAMINE	D - 131
1dpj_A_119	1dpj	A	MANALPHA-D-MANNOSE	K - 132
1dpj_A_119	1dpj	A	NAGN-ACETYL-D-GLUCOSAMINE	K - 132
1dpj_A_119	1dpj	A	MANALPHA-D-MANNOSE	V - 133
1dpj_A_119	1dpj	A	NAGN-ACETYL-D-GLUCOSAMINE	V - 133
1dpj_A_119	1dpj	A	MANALPHA-D-MANNOSE	V - 134
1dpj_A_119	1dpj	A	NAGN-ACETYL-D-GLUCOSAMINE	V - 134
1dpj_A_119	1dpj	A	MANALPHA-D-MANNOSE	P - 135
1dpj_A_119	1dpj	A	MANALPHA-D-MANNOSE	Y - 138
1dpj_A_119	1dpj	A	MANALPHA-D-MANNOSE	N - 139
1dpj_A_119	1dpj	A	MANALPHA-D-MANNOSE	I - 141
1dpj_A_119	1dpj	A	MANALPHA-D-MANNOSE	Q - 142
1hrn_A_119	1hrn	A	CHA1-HYDROXY-2-AMINO-3-CYCLOHEXYLPROPANE	G - 119
1hrn_A_119	1hrn	A	CHA1-HYDROXY-2-AMINO-3-CYCLOHEXYLPROPANE	V - 120
1hrn_A_119	1hrn	A	IP31-HYDROXY-3-METHYLBUTANE	Q - 128
1hrn_A_119	1hrn	A	NAGN-ACETYL-D-GLUCOSAMINE	G - 131
1lf2_A_122	1lf2	A	R373-AMINO-N-{4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-1-ISOBUTYL-5-PHENYL-PENTYL}-BENZAMIDE	I - 123
1lf2_A_122	1lf2	A	R373-AMINO-N-{4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-1-ISOBUTYL-5-PHENYL-PENTYL}-BENZAMIDE	L - 131
1lf2_A_122	1lf2	A	R373-AMINO-N-{4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-1-ISOBUTYL-5-PHENYL-PENTYL}-BENZAMIDE	S - 132
1lf2_A_122	1lf2	A	R373-AMINO-N-{4-[2-(2,6-DIMETHYL-PHENOXY)-ACETYLAMINO]-3-HYDROXY-1-ISOBUTYL-5-PHENYL-PENTYL}-BENZAMIDE	I - 133
1pso_E_119	1pso	E	STASTATINE	I - 120
1pso_E_119	1pso	E	STASTATINE	I - 128
1pso_E_119	1pso	E	STASTATINE	S - 130
1qs8_A_122	1qs8	A	STASTATINE	I - 123
1qs8_A_122	1qs8	A	STASTATINE	L - 131
1qs8_A_122	1qs8	A	STASTATINE	I - 133
1qs8_A_122	1qs8	A	STASTATINE	G - 134
1qs8_A_122	1qs8	A	STASTATINE	S - 135
1smr_A_119	1smr	A	LPLLEU-HYDROXYETHYLENE-LEU	V - 120
1smr_A_119	1smr	A	LPLLEU-HYDROXYETHYLENE-LEU	Q - 128

Clusters included in this Subclass

CLUSTER: EH.12.1

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