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Information on SUBCLASS 13.4.1
Subclass Accession number: 3591
Subclass: 13.4.1 PSSM
Type: EH beta-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.3 (>75 %)  1.3.99 (>75 %)  1.3.99.1
GO : GO:0000104 (>50 %)  GO:0008460 (>75 %)  GO:0016627 (>50 %)  GO:0016829 (>75 %)  GO:0016835 (>75 %)  GO:0016836 (>75 %)  
SCOP : 51734 (>75 %)  51735 (>75 %)  51751 (>75 %)  56424 (>75 %)  56425 (>75 %)  56426 (>75 %)  
 Number of loops: 4

Average sequence ID (%) : 48.6 +/- 21.1
Average RMSD (Å) : 0.450 +/- 0.238

Consensus geometry
d (Å): 31 delta (°): 45-90 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: XhhpRXGpXhXYhhDAX
(φψ)-conformation: pbpppplppabbbpbaa
Pattern: [DHRT][FHKY][AV][APT][DR][R]x[G][DH]xx[AR][Y]x[AIL][D][AG][GS][K][AIL][DERS][DR][E][L]
Conservation:-1.056-0.676-0.292-0.714-0.2941.161-0.9611.6670.414-0.836-1.290-0.3272.174-0.880-0.6451.667-0.133-0.1441.161-0.651-0.802-0.3571.1610.654
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1kew_A_2911kew   A292315TYVADRPGHDRRYAIDAGKISRELEEE---TT---B--B--HHHHHHHbxbpxxxvpxabbbxbaaaaaaaa
1oc2_A_2791oc2   A279302DHVTDRAGHDLRYAIDASKLRDELEEE---TT---B--B--HHHHHHHbxbpxxxvpxabbbbxaaaaaaaa
1r6d_A_2681r6d   A269292RKVADRKGHDLRYSLDGGKIERELEEE---TT---B--B--HHHHHHHbxbpxxxvpxabbbbxaaaaaaaa
1udb_*_2861udb   -287310HFAPRREGDLPAYWADASKADRELEEE---TT--SB--B--HHHHHHHbxbxpxpvxxabbbxbaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kew_A_2911kew   A     TYDTHYMIDINE-5'- DIPHOSPHATE V - 294
1kew_A_2911kew   A     GOLGLYCEROL V - 294
1kew_A_2911kew   A     GOLGLYCEROL A - 295
1kew_A_2911kew   A     GOLGLYCEROL D - 296
1kew_A_2911kew   A     TYDTHYMIDINE-5'- DIPHOSPHATE R - 297
1kew_A_2911kew   A     TYDTHYMIDINE-5'- DIPHOSPHATE H - 300
1kew_A_2911kew   A     TYDTHYMIDINE-5'- DIPHOSPHATE D - 301
1kew_A_2911kew   A     TYDTHYMIDINE-5'- DIPHOSPHATE Y - 304
1kew_A_2911kew   A     GOLGLYCEROL K - 310
1oc2_A_2791oc2   A     TDXTHYMIDINE-5'-DIPHOSPHO-BETA-D-XYLOSE V - 281
1oc2_A_2791oc2   A     TDXTHYMIDINE-5'-DIPHOSPHO-BETA-D-XYLOSE R - 284
1oc2_A_2791oc2   A     TDXTHYMIDINE-5'-DIPHOSPHO-BETA-D-XYLOSE H - 287
1oc2_A_2791oc2   A     TDXTHYMIDINE-5'-DIPHOSPHO-BETA-D-XYLOSE D - 288
1oc2_A_2791oc2   A     TDXTHYMIDINE-5'-DIPHOSPHO-BETA-D-XYLOSE Y - 291
1r6d_A_2681r6d   A     DAU2'DEOXY-THYMIDINE-5'-DIPHOSPHO-ALPHA-D-GLUCOSE V - 271
1r6d_A_2681r6d   A     DAU2'DEOXY-THYMIDINE-5'-DIPHOSPHO-ALPHA-D-GLUCOSE R - 274
1r6d_A_2681r6d   A     DAU2'DEOXY-THYMIDINE-5'-DIPHOSPHO-ALPHA-D-GLUCOSE H - 277
1r6d_A_2681r6d   A     DAU2'DEOXY-THYMIDINE-5'-DIPHOSPHO-ALPHA-D-GLUCOSE D - 278
1r6d_A_2681r6d   A     DAU2'DEOXY-THYMIDINE-5'-DIPHOSPHO-ALPHA-D-GLUCOSE Y - 281
1udb_*_2861udb   *     UFGURIDINE-5'-DIPHOSPHATE-4-DEOXY-4-FLUORO-ALPHA-D-GALACTOSE R - 292
1udb_*_2861udb   *     UFGURIDINE-5'-DIPHOSPHATE-4-DEOXY-4-FLUORO-ALPHA-D-GALACTOSE G - 294
1udb_*_2861udb   *     UFGURIDINE-5'-DIPHOSPHATE-4-DEOXY-4-FLUORO-ALPHA-D-GALACTOSE D - 295
1udb_*_2861udb   *     UFGURIDINE-5'-DIPHOSPHATE-4-DEOXY-4-FLUORO-ALPHA-D-GALACTOSE L - 296
1udb_*_2861udb   *     UFGURIDINE-5'-DIPHOSPHATE-4-DEOXY-4-FLUORO-ALPHA-D-GALACTOSE P - 297
1udb_*_2861udb   *     UFGURIDINE-5'-DIPHOSPHATE-4-DEOXY-4-FLUORO-ALPHA-D-GALACTOSE Y - 299
1udb_*_2861udb   *     PEGDI(HYDROXYETHYL)ETHER E - 309
1udb_*_2861udb   *     PEGDI(HYDROXYETHYL)ETHER L - 310

Clusters included in this Subclass
CLUSTER: EH.13.19