ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 13.7.1

Subclass Accession number: 3594
Subclass: 13.7.1

Type: EH beta-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
SCOP : 54636 (>75 %) 54637 (>75 %) 89902 (>50 %)

Number of loops: 3

Average sequence ID (%) : 22.2 +/- 17.9
Average RMSD (Å) : 0.833 +/- 0.231

Consensus geometry

d (Å): 13

delta (°): 45-90

theta (°): 135-180

rho (°): 270-315

Consensus Sequence:	hpVpXpXXpXXGXhpXh
(φψ)-conformation:	bbpbaaapbaalbppaa

Pattern:	[AF]	x	[AVW]	[APS]	[GV]	[ER]	[V]	[RTY]	x	[DET]	x	x	[DNQ]	x	x	[G]	[LTV]	[AV]	[HY]	x	[AG]	x	[LY]	[CVY]	[A]	[FL]	[AY]	[DE]	x	[AL]	x	[AT]	[EL]	[AM]	x	x
Conservation:	-0.275	-0.869	-0.788	-0.303	-0.600	0.595	1.559	-0.788	-1.112	-0.060	-1.193	-0.869	0.183	-0.950	-0.303	3.015	-0.303	0.218	2.344	0.505	0.789	-0.707	0.780	-0.384	1.559	0.401	-0.177	1.375	-0.707	-0.078	-1.112	0.517	-0.489	-0.035	-0.626	-1.112

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1j1y_A_20	1j1y	A	21	56	AVVAGEVRADHLNLHGTAHGGFLYALADSAFALASN	EEEEEE--GGGB-TTSBB-HHHHHHHHHHHHHHHHH	bbbbbbxxaaaxbaavbpxaaaaaaaaaaaaaaaaa
1q4t_A_45	1q4t	A	46	81	ATASVEVTDTLRQRWGLVHGGAYCALAEMLATEATV	EEEEEE--GGGB-TTSSB-HHHHHHHHHHHHHHHHH	bbbbbxxbaaabbaavbxxaaaaaaaaaaaaaaaaa
1s5u_A_6	1s5u	A	6	41	FRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLR	EEEEEE--GGGB-TTSSB-HHHHHHHHHHHHHHHHH	xbbwbxxbaaaxbaavbxxaaaaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1j1y_A_20	1j1y	A	MGMAGNESIUM ION	R - 28
1j1y_A_20	1j1y	A	MGMAGNESIUM ION	D - 30
1q4t_A_45	1q4t	A	4CO4-HYDROXYPHENACYL COENZYME A	Q - 58
1q4t_A_45	1q4t	A	EGLETHYLENE GLYCOL	Q - 58
1q4t_A_45	1q4t	A	4CO4-HYDROXYPHENACYL COENZYME A	R - 59
1q4t_A_45	1q4t	A	4CO4-HYDROXYPHENACYL COENZYME A	W - 60
1q4t_A_45	1q4t	A	EGLETHYLENE GLYCOL	W - 60
1q4t_A_45	1q4t	A	4CO4-HYDROXYPHENACYL COENZYME A	L - 62
1q4t_A_45	1q4t	A	4CO4-HYDROXYPHENACYL COENZYME A	V - 63
1q4t_A_45	1q4t	A	4CO4-HYDROXYPHENACYL COENZYME A	H - 64
1q4t_A_45	1q4t	A	4CO4-HYDROXYPHENACYL COENZYME A	G - 65
1q4t_A_45	1q4t	A	4CO4-HYDROXYPHENACYL COENZYME A	G - 66
1q4t_A_45	1q4t	A	4CO4-HYDROXYPHENACYL COENZYME A	Y - 68
1q4t_A_45	1q4t	A	4CO4-HYDROXYPHENACYL COENZYME A	A - 70
1q4t_A_45	1q4t	A	4CO4-HYDROXYPHENACYL COENZYME A	E - 73
1q4t_A_45	1q4t	A	4CO4-HYDROXYPHENACYL COENZYME A	M - 74
1q4t_A_45	1q4t	A	4CO4-HYDROXYPHENACYL COENZYME A	T - 77
1q4t_A_45	1q4t	A	EGLETHYLENE GLYCOL	T - 77
1q4t_A_45	1q4t	A	4CO4-HYDROXYPHENACYL COENZYME A	E - 78
1q4t_A_45	1q4t	A	4CO4-HYDROXYPHENACYL COENZYME A	V - 81
1q4t_A_45	1q4t	A	EGLETHYLENE GLYCOL	V - 81
1q4t_A_45	1q4t	A	EGLETHYLENE GLYCOL	V - 84

Clusters included in this Subclass