ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 26.1.1

Subclass Accession number: 3635
Subclass: 26.1.1

Type: EH beta-alpha
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 2.4 (>50 %)  2.4 (>50 %)  2.4.1 (>50 %)  2.4.1 (>50 %)  2.4.1.19 2.4.1.19
GO : GO:0004553 (>50 %)  GO:0004553 (>75 %)  GO:0005509 (>50 %)  GO:0005509 (>75 %)  GO:0016160 (>50 %)  GO:0016160 (>75 %)  GO:0016757 (>50 %)  GO:0016798 (>50 %)  GO:0016798 (>75 %)
SCOP : 51445 (>75 %)  51445 (>75 %)  51446 (>75 %)  51446 (>75 %)

Number of loops: 3

Average sequence ID (%) : 69.2 +/- -21.0
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry

d (Å): 13

delta (°): 45-90

theta (°): 135-180

rho (°): 180-225

Consensus Sequence:	IYYGpEQYMXGGpDPpNRhXhPXFpTpTTA
(φψ)-conformation:	bpplaaalpbepppwaaapppabapaapaa

Pattern:	[TV]	[P]	[AS]	[I]	[Y]	[Y]	[G]	[ST]	[E]	[Q]	[Y]	[M]	[AS]	[G]	[G]	[NT]	[D]	[P]	[DY]	[N]	[R]	[AG]	[MR]	[ILM]	[P]	[AS]	[F]	[DS]	[T]	[ST]	[T]	[T]	[A]	[FY]	[KQ]	x	[IV]	[QS]	[KT]	[L]
Conservation:	-1.137	1.500	-0.986	-0.158	1.500	1.500	0.947	-0.768	0.394	0.394	1.500	0.394	-0.986	0.947	0.947	-0.757	0.947	1.500	-1.410	0.947	0.394	-1.012	-1.260	-0.957	1.500	-0.986	0.947	-1.012	0.394	-0.774	0.394	0.394	-0.158	0.272	-0.709	-1.688	-0.434	-1.110	-1.260	-0.158

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1kcl_A_355	1kcl	A	355	394	VPAIYYGTEQYMSGGTDPDNRARIPSFSTSTTAYQVIQKL	EEEEETTGGGT----STTTT--------S-SHHHHHHHHH	bwbbxpvaaalxbexxpwaaaxxpwbaxaaxaaaaaaaaa
1pam_A_355	1pam	A	355	394	VPAIYYGSEQYMSGGNDPDNRARLPSFSTTTTAYQVIQKL	EEEEETTGGGT----STTGGG-------S-SHHHHHHHHH	bwbbxpvaaalxbexxpwaaaxxxabaxaaxaaaaaaaaa
1qho_A_356	1qho	A	356	395	TPSIYYGTEQYMAGGNDPYNRGMMPAFDTTTTAFKEVSTL	EEEEETTGGGT----STTTT--------TTSHHHHHHHHH	bwbbxpvaaavxbexxpwaaaxxpabaxaaxaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1kcl_A_355	1kcl	A	GLCGLUCOSE	D - 371
1kcl_A_355	1kcl	A	GLCGLUCOSE	R - 375
1qho_A_356	1qho	A	ABDACARBOSE DERIVED HEXASACCHARIDE	N - 371
1qho_A_356	1qho	A	ABDACARBOSE DERIVED HEXASACCHARIDE	D - 372
1qho_A_356	1qho	A	ABDACARBOSE DERIVED HEXASACCHARIDE	P - 373
1qho_A_356	1qho	A	ABDACARBOSE DERIVED HEXASACCHARIDE	R - 376

Clusters included in this Subclass