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Information on SUBCLASS 1.1.4
Subclass Accession number: 3644
Subclass: 1.1.4 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 69

Average sequence ID (%) : 10.9 +/- 14.0
Average RMSD (Å) : 0.499 +/- 0.147

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 90-135
Consensus Sequence: XXcXp
(φψ)-conformation: bblbb
Pattern: xxxx[degknqrst]x[dehnqrstwy][acfilmvwy]x
Conservation:-1.000-0.068-1.123-0.3601.422-0.554-0.3041.655-0.668
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b2p_A_161b2p   A1624ILHATESLEEEETT-EEEbbxpvxbxb
1bn8_A_1391bn8   A139146.KVVGGNFQ.EEES-EEE.bbbvxbxb
1cf3_A_2421cf3   A243251QVLTGQYVGEEEES-EEEbbbbvbxxa
1cwv_A_8171cwv   A817825TIFKNATFQEEETT-EEEbbbpvxbbb
1czf_A_901czf   A92100MSGEHITVTEEEES-EEEbbeblxbbb
1dar_*_3341dar   -334342TLTSGSYVYEEESS-EEEbbbpvbbbb
1ds6_B_981ds6   B100108VLKEGSEYREEETT-EEExbxpvxxbb
1e30_A_591e30   A5965..KKNPTLE..EES-EEE..bxlxxbb
1ee6_A_1661ee6   A167175GRIVNTRYSEEEES-EEEbbbblbxbb
1efc_A_2351efc   A235243IIKVGEEVEEEETT-EEEbbbxvxxbb
1exm_A_2461exm   A246254KVKVGDEVEEEETT-EEEbbbpgxxbb
1eyq_A_1431eyq   A143151NFPPGASVFEE-TT-EEEbbxpgxbbb
1f00_I_7751f00   I775783VWLQYGQVNEEETT-EEEbbxpvxbbb
1g97_A_2971g97   A297303.YVVDSTI..EEES-EE..bbblbbb.
1g97_A_3131g97   A313319.MIEESSV..EEES-EE..bbblbbb.
1g97_A_3361g97   A336344SLGAQVHIGEE-TT-EEEbbxpvxbbx
1gq8_A_1441gq8   A145153QFFINCFIAEEEES-EEEbbbblbbbb
1gq8_A_2321gq8   A233240TVVMQSSI.EEEES-EE.bbbblbbb.
1hn0_A_8091hn0   A812820TLQQGDWLIEE-TT-EEEbbbpvxbbb
1hv9_A_2971hv9   A297303.VIKNSVI..EEES-EE..bbblbbb.
1hv9_A_3141hv9   A314320.VVEDANL..EEES-EE..bbblbbb.
1ia5_A_671ia5   A6977VSGSDLTITEEEES-EEEbbeblxbbb
1j3b_A_2941j3b   A294300.ILENVVV..EEES-EE..bbxvxxb.
1jer_*_311jer   -3138.FRVGDSLQ.EETT-EEE.bbpgxbbb
1ju2_A_2091ju2   A210218RVGVHASVEEEEES-EEEbbbblbxxa
1jva_A_2851jva   A285292.FAKGTNVL.EETT-EEE.bxxvpxbx
1kbl_A_4881kbl   A489497TFAEGDYISEEETT-EEExbbpgxxbb
1khb_A_3561khb   A356363.IFTNVAET.EEES-EEE.bbbvxxbx
1kid_*_2131kid   -213221VELESPFILEEEES-EEEbbbxlxxbx
1l0s_A_281l0s   A3038SEVFGTTCTEEEES-EEEbbbblbbbb
1l0s_A_811l0s   A8188.KISGCTFS.EEES-EEE.bbblbbbb
1lm8_V_1061lm8   V110118HSYRGHLWLEEETT-EEEbbbpvxbbb
1ly2_A_211ly2   A2128.IAVGTVIR.EETT-EEE.xxxgxbbb
1ly2_A_881ly2   A8895.YRHGDSVT.EETT-EEE.xxpvxbbb
1m8n_A_1121m8n   A112119.KISGCSLS.EEES-EEE.bbbvbbbb
1m8n_A_211m8n   A2128.TATNCYID.EEES-EEE.bbblbbbb
1m8n_A_261m8n   A2633.YIDNSQLV.EEES-EEE.bbblbbbb
1m8n_A_371m8n   A3744.ICTRSQYS.EEES-EEE.bbblbbbb
1m8n_A_421m8n   A4249.QYSDANVK.EEES-EEE.bbblbbbb
1m8n_A_471m8n   A4754.NVKKSVTT.EEES-EEE.bbblbbbb
1m8n_A_51m8n   A511.VNTNSQI..EEES-EE..xxblbxb.
1m8n_A_521m8n   A5259.VTTDCNID.EEES-EEE.bbblbbbb
1m8n_A_571m8n   A5764.NIDKSQVY.EEES-EEE.bbblbbbb
1m8n_A_621m8n   A6269.QVYLTTCT.EEES-EEE.bbblbbbb
1ne6_A_1521ne6   A155163SFIAGETVIEE-TT-EEEbbbpvxbab
1nhc_A_991nhc   A99105..GKDLTVT..EES-EEE..eblxbbb
1nhp_*_2061nhp   -207215TIATGETVEEEEES--EExbbxvbxxa
1npl_A_31npl   A310ILYSGETL.EEETT-EE.bbxpvbbb.
1npl_A_91npl   A917TLSPGEFLNEE-TT-EEEbbxpvxbbb
1o4t_A_841o4t   A8795PIKAGDVCFEEETT-EEEwbbpvxbbb
1o7f_A_3921o7f   A396403TLHEGDDF.EEETT-EE.bbbpgxbb.
1ok3_A_231ok3   A2330.FPEDTVIT.EETT-EEE.bxpvxbbb
1oru_A_1681oru   A169177AVYTGDEIEEEETT-EEExbbpvpxbb
1pe9_A_991pe9   A99106.KFINGSLI.EEESSEEE.bbbvbbxb
1pmi_*_4031pmi   -404412KIDTGYVFFEEETT-EEExbxpvxbbx
1pn2_A_1231pn2   A131138YFIRNCQA.EEETT-EE.bbbxvbbb.
1q5x_A_1261q5x   A126132..ESDVRVN..EES--EE..bblbxbb
1qcs_A_1291qcs   A129137AFSVGQQLVEEETT-EEExbbxvxbbb
1qjv_A_1861qjv   A187195SFFSDCRISEEEES-EEEbbbblbbbb
1qjv_A_2061qjv   A207215ALFNNCDLVEEEES-EEEbbbblbxxx
1qjv_A_2441qjv   A244252LVITNSRVIEEEES-EEExbbblbbxb
1qjv_A_2881qjv   A289296TVFLNTSM.EEEES-EE.bbbblbxb.
1qre_A_1321qre   A132140FIGMQAFVFEE-TT-EEExbxpvxbbb
1qre_A_1551qre   A155161.AAIGVTI..EEES-EE..bbbvbbx.
1qwr_A_2841qwr   A287295PLKKGDHFIEEETT-EEEObbpgxbbb
1ssx_A_151ssx   A1523NIVGGIEYSEEEET-EEExxbpvxxbb
1uxz_A_131uxz   A1320.QQSGTQQE.EEES-EEE.bbbvbbxb
1vj2_A_751vj2   A7785TVEEGFYIFEEETT-EEExbbpgxbbb
3lad_A_2363lad   A237245KILLGARVTEEEET-EEEbxbxvxbxa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cf3_A_2421cf3   A     FADFLAVIN-ADENINE DINUCLEOTIDE Q - 248
1cf3_A_2421cf3   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 249
1cf3_A_2421cf3   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 250
1cf3_A_2421cf3   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 251
1czf_A_901czf   A     ZNZINC ION E - 95
1czf_A_901czf   A     ZNZINC ION H - 96
1eyq_A_1431eyq   A     NARNARINGENIN Y - 152
1ju2_A_2091ju2   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 215
1ju2_A_2091ju2   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 216
1ju2_A_2091ju2   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 217
1ju2_A_2091ju2   A     FADFLAVIN-ADENINE DINUCLEOTIDE E - 218
1khb_A_3561khb   A     EDO1,2-ETHANEDIOL F - 357
1l0s_A_281l0s   A     TYI3,5-DIIODOTYROSINE D - 28
1l0s_A_281l0s   A     CDCADMIUM ION D - 28
1l0s_A_281l0s   A     TYI3,5-DIIODOTYROSINE C - 37
1lm8_V_1061lm8   V     HYP4-HYDROXYPROLINE I - 109
1lm8_V_1061lm8   V     HYP4-HYDROXYPROLINE H - 110
1lm8_V_1061lm8   V     HYP4-HYDROXYPROLINE S - 111
1lm8_V_1061lm8   V     HYP4-HYDROXYPROLINE Y - 112
1lm8_V_1061lm8   V     HYP4-HYDROXYPROLINE H - 115
1lm8_V_1061lm8   V     HYP4-HYDROXYPROLINE W - 117
1ne6_A_1521ne6   A     SP16-(6-AMINO-PURIN-9-YL)-2-THIOXO-TETRAHYDRO-2-FURO[3,2-D][1,3,2]DIOXAPHOSPHININE-2,7-DIOL I - 163
1npl_A_31npl   A     PO4PHOSPHATE ION I - 3
1npl_A_31npl   A     PO4PHOSPHATE ION Y - 5
1npl_A_31npl   A     PO4PHOSPHATE ION S - 6
1npl_A_31npl   A     PO4PHOSPHATE ION G - 7
1npl_A_31npl   A     PO4PHOSPHATE ION E - 8
1oru_A_1681oru   A     MSESELENOMETHIONINE T - 172
1oru_A_1681oru   A     MSESELENOMETHIONINE I - 176
1oru_A_1681oru   A     MSESELENOMETHIONINE E - 177
1oru_A_1681oru   A     MSESELENOMETHIONINE V - 178
1oru_A_1681oru   A     MSESELENOMETHIONINE H - 179
1pn2_A_1231pn2   A     MSESELENOMETHIONINE R - 134
1qcs_A_1291qcs   A     MSESELENOMETHIONINE F - 130
1qcs_A_1291qcs   A     MSESELENOMETHIONINE F - 138
1qcs_A_1291qcs   A     MSESELENOMETHIONINE F - 140
1qwr_A_2841qwr   A     MSESELENOMETHIONINE L - 296

Clusters included in this Subclass
CLUSTER: AR.1.11
CLUSTER: AR.2.4
CLUSTER: AR.3.16