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Information on SUBCLASS 5.10.2
Subclass Accession number: 369
Subclass: 5.10.2 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1.18 (>50 %)  1.18.6 (>50 %)  1.18.6.1
GO : GO:0005351 (>75 %)  GO:0005386 (>75 %)  GO:0015144 (>75 %)  GO:0015290 (>75 %)  GO:0015291 (>75 %)  GO:0016163 (>50 %)  GO:0016730 (>50 %)  GO:0016732 (>50 %)  GO:0030151 (>50 %)  GO:0046914 (>50 %)  GO:0051119 (>75 %)  
SCOP : 53799 (>50 %)  53807 (>50 %)  53816 (>50 %)  53821 (>75 %)  53822 (>75 %)  53823 (>75 %)  
Number of loops: 4

Average sequence ID (%) : 24.5 +/- 19.1
Average RMSD (Å) : 0.750 +/- 0.173

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: pXpPpXXXI
(φψ)-conformation: aabaapabb
Pattern: [LV]x[AKV][AIM]x[ANR]x[L][DNQT][ART][DHN][P][DENT][IKV][AKQS]x[IV]
Conservation:0.501-0.940-0.620-0.231-0.903-0.374-0.6441.241-0.385-0.4050.4913.015-0.238-0.389-0.459-0.6641.005
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1drk_*_1661drk   -170186LNVMQNLLTAHPDVQAVHHHHHHHHHH-TT--EEaaaaaaaaaabaapabb
1gud_A_1771gud   A181197LDVATNVLQRNPNIKAIHHHHHHHHHH-TT--EEaaaaaaaaaabaapabb
1m32_A_1191m32   A119135VQAIDAILNADPTISHIHHHHHHHHHH-TT--EEaaaaaaaaaabaaxabb
1qg8_A_1061qg8   A107123LLKMVRELDTHPEKAVIHHHHHHHHHH-TT--EEaaaaaaaaaabaaxabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gud_A_1771gud   A     ZNZINC ION D - 182
1gud_A_1771gud   A     ZNZINC ION N - 186
1m32_A_1191m32   A     MSESELENOMETHIONINE I - 122
1m32_A_1191m32   A     MSESELENOMETHIONINE I - 135
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gud_A_1771gud   A ZN1ZN BINDING SITE FOR CHAIN AD - 182

Clusters included in this Subclass
CLUSTER: HE.4.119