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Information on SUBCLASS 2.1.1
Subclass Accession number: 3691
Subclass: 2.1.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 45

Average sequence ID (%) : 8.1 +/- 13.0
Average RMSD (Å) : 0.642 +/- 0.185

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 45-90 rho (°): 90-135
Consensus Sequence: XXhXXX
(φψ)-conformation: bbpabb
Pattern: [acfgiklmtv]x[afgilmpvy][adegkqrst]xxxx
Conservation:-0.586-0.3481.4901.028-0.838-0.746-1.000-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aug_A_791aug   A7985TPERVAI.EEBSEEE.bpxabbb.
1bet_*_351bet   -3744TVLAEVNIEE-SEEEExxxabbbb
1bkb_*_771bkb   -8186AQILSV..EE--EE..bbxabb..
1bnd_A_351bnd   A3743TVLEKVP.EE-SEEE.xxxabbx.
1c4q_A_1611c4q   A161168GGFSEVIFEE--EEEExxbabbbb
1d2e_A_2591d2e   A260267LPVESVYSEE--EEEEbxxabbbb
1d5t_A_1021d5t   A103110KVVEGSFVEE--EEEEbxxabbbb
1dar_*_3481dar   -350357ERVARLLREE--EEEEbbxabbbb
1dar_*_4841dar   -485492ETITKPVDEE-SS-EEbbbabwbb
1dyp_A_1591dyp   A163168EIDVVE..EE-SEE..bbbabb..
1edq_A_4371edq   A440447GTAMYGRGEEESEEEExbbabbbb
1efc_A_2111efc   A212219LPIEDVFSEE--EEEEbxxabbbx
1exm_A_2221exm   A223230MPVEDVFTEE--EEEEbxxabbbb
1fp3_A_2241fp3   A224230AVLENVS.EE-SEEE.bbbabbx.
1gd7_A_771gd7   A7783FLSEVLV.EEE-SEE.xxbabbx.
1gs5_A_1421gs5   A144150VVSSIGV.EE-SEEE.bbxaxbb.
1hjx_A_2541hjx   A257264GIPTFGRSEEESEEEExbxabbbb
1hkk_A_2601hkk   A263270GMPTYGRSEEESEEEExbxabbbb
1hpg_A_401hpg   A4249CSAAFNVTEE--EEEEbbxabxbb
1hrn_A_2811hrn   A282288CTLAIHA.EEBSEEE.bxbabbb.
1jhd_A_1111jhd   A115122MDIEAIEEEE--EEEEbbxabbbx
1jlr_A_2181jlr   A218223AVDICL..EE-SEE..bbxabb..
1jnd_A_2721jnd   A275282GVATYGNAEEESEEEExbbabbxb
1k82_A_461k82   A4653QPVLSVQREEB-EEEEbxxabbbb
1ko7_A_2211ko7   A222229KRLRLNIHEE--EEEEbxxabbbb
1led_*_501led   -5461ASYSEPVFEEESS-EEbbxaxxbx
1lug_A_2051lug   A209216IVLKEPISEESS-EEEbbxaxxxx
1mnn_A_1481mnn   A148155LRVQYFAIEE--EEEEbxxabxbb
1n0u_A_4261n0u   A429436KAIQRVVLEE--EEEEbxpabbbx
1o5o_A_1831o5o   A183188ALDERL..EE-SEE..bbxabb..
1oi4_A_721oi4   A7378VTIDKS..EE--EE..bxxabx..
1p3c_A_1461p3c   A150155GSVTRE..EE--EE..bxxabb..
1p80_A_6471p80   A648653LPIAAT..EE--EE..bxxabx..
1pso_E_1801pso   E182187VPVTVE..EE-SEE..bxxabx..
1q16_A_12211q16   A12251230RKMKNI..EE-SEE..bxxaxb..
1q2b_A_2021q2b   A202209GIGGHGSCEE-SEEEEbbbabbbb
1s0u_A_2911s0u   A297304TKIVSLAAEE--EEEEbbxabbbb
1sgp_E_411sgp   E4249CSLGFNVREE--EEEEbbxabxbb
1smr_A_2811smr   A282288CTVALHA.EEBSEEE.bxxabbx.
1ug9_A_4931ug9   A493498YYLRIS..EE-SEE..bxxabb..
1v47_A_801v47   A8592LHVAEAYEEE--EEEEbbpabbbb
1wbf_A_461wbf   A4956ALYAKPVQEEESS-EEbbxabxbx
1www_V_351www   V3743MVLGEVN.EE-SEEE.xbxabbb.
2hlc_A_812hlc   A8390VNSERIISEE-SEEEEbxxabbbx
3psg_*_1803psg   -182187VPVSVE..EE-SEE..bxxabx..
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bkb_*_771bkb   *     MSESELENOMETHIONINE F - 79
1bkb_*_771bkb   *     MSESELENOMETHIONINE T - 80
1bkb_*_771bkb   *     MSESELENOMETHIONINE A - 81
1bkb_*_771bkb   *     MSESELENOMETHIONINE Q - 82
1bkb_*_771bkb   *     MSESELENOMETHIONINE I - 83
1bkb_*_771bkb   *     MSESELENOMETHIONINE L - 84
1bkb_*_771bkb   *     MSESELENOMETHIONINE V - 86
1c4q_A_1611c4q   A     GALD-GALACTOSE G - 161
1c4q_A_1611c4q   A     GALD-GALACTOSE G - 162
1c4q_A_1611c4q   A     GALD-GALACTOSE F - 163
1c4q_A_1611c4q   A     GALD-GALACTOSE S - 164
1c4q_A_1611c4q   A     GALD-GALACTOSE E - 165
1dyp_A_1591dyp   A     MSESELENOMETHIONINE Y - 161
1dyp_A_1591dyp   A     MSESELENOMETHIONINE S - 162
1dyp_A_1591dyp   A     MSESELENOMETHIONINE E - 163
1dyp_A_1591dyp   A     CDCADMIUM ION E - 163
1dyp_A_1591dyp   A     MSESELENOMETHIONINE I - 164
1dyp_A_1591dyp   A     MSESELENOMETHIONINE D - 165
1dyp_A_1591dyp   A     CDCADMIUM ION D - 165
1dyp_A_1591dyp   A     MSESELENOMETHIONINE V - 166
1dyp_A_1591dyp   A     CDCADMIUM ION E - 168
1gs5_A_1421gs5   A     NLGN-ACETYL-L-GLUTAMATE S - 147
1hjx_A_2541hjx   A     GOLGLYCEROL F - 261
1hjx_A_2541hjx   A     GOLGLYCEROL R - 263
1hkk_A_2601hkk   A     NAAN-ACETYL-D-ALLOSAMINE Y - 267
1hkk_A_2601hkk   A     AMIALLOSAMIZOLINE Y - 267
1hkk_A_2601hkk   A     NAAN-ACETYL-D-ALLOSAMINE R - 269
1hkk_A_2601hkk   A     AMIALLOSAMIZOLINE R - 269
1jlr_A_2181jlr   A     PO4PHOSPHATE ION L - 223
1led_*_501led   *     FUCFUCOSE S - 50
1lug_A_2051lug   A     HGMERCURY (II) ION C - 205
1lug_A_2051lug   A     MBOMERCURIBENZOIC ACID C - 205
1lug_A_2051lug   A     HGMERCURY (II) ION V - 206
1lug_A_2051lug   A     MBOMERCURIBENZOIC ACID V - 206
1lug_A_2051lug   A     SUA(4-SULFAMOYL-PHENYL)-THIOCARBAMIC ACID O-(2-THIOPHEN-3-YL-ETHYL) ESTER V - 206
1lug_A_2051lug   A     ZNZINC ION W - 208
1lug_A_2051lug   A     SUA(4-SULFAMOYL-PHENYL)-THIOCARBAMIC ACID O-(2-THIOPHEN-3-YL-ETHYL) ESTER W - 208
1o5o_A_1831o5o   A     U5PURIDINE-5'-MONOPHOSPHATE L - 188
1q2b_A_2021q2b   A     COCOBALT (II) ION G - 205
1q2b_A_2021q2b   A     COCOBALT (II) ION H - 206
1sgp_E_411sgp   E     PO4PHOSPHATE ION R - 41
1smr_A_2811smr   A     PIVPIVALIC ACID T - 283
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1hjx_A_2541hjx   A CC2GOL BINDING SITE FOR CHAIN AF - 261
1hkk_A_2601hkk   A AC2NAA BINDING SITE FOR CHAIN AY - 267
1hkk_A_2601hkk   A AC4NAA BINDING SITE FOR CHAIN AR - 269

Clusters included in this Subclass
CLUSTER: AR.1.8
CLUSTER: AR.2.11
CLUSTER: AR.3.14