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Information on SUBCLASS 5.11.1
Subclass Accession number: 370
Subclass: 5.11.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 6.3 (>75 %)  6.3.2 (>75 %)  6.3.2.19
GO : GO:0004840 (>75 %)  GO:0004842 (>75 %)  GO:0004872 (>50 %)  GO:0004888 (>50 %)  GO:0008639 (>75 %)  GO:0016874 (>75 %)  GO:0016879 (>75 %)  GO:0016881 (>75 %)  GO:0030106 (>75 %)  
SCOP : 48725 (>75 %)  48726 (>75 %)  48942 (>75 %)  54451 (>75 %)  54452 (>75 %)  54453 (>75 %)  54494 (>75 %)  54495 (>75 %)  54496 (>75 %)  
 Number of loops: 11

Average sequence ID (%) : 9.7 +/- 11.8
Average RMSD (Å) : 0.909 +/- 0.336

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XXhXXpXXh
(φψ)-conformation: aabpaapbb
Pattern: [filv]xxx[ACGLTV][adegpst]x[dehknr][adstv]x[filv]x
Conservation:1.594-1.187-0.101-0.7090.106-0.363-0.0150.5940.004-0.4771.960-1.404
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b77_A_571b77   A6374ILSLVSDDAEISHHTTS-TT-EEEaaaabpaapxbb
1f14_A_1121f14   A122133LDKFAAEHTIFAHHHHS-TT-EEEaaaapxaapbbb
1fc4_A_1191fc4   A119130FETLLGAEDAIIHHHH--TT-EEEaaaabbaabbbb
1ile_*_6111ile   -618629IYVSAPPEADRRHHHHS-SSS-EEaaaabwaapbbx
1iq0_A_4301iq0   A445456SMVKTEPKKQIDHHHHS-TTS-EEaaaaxpaaxxbb
1jtk_A_871jtk   A93104ISELCTKDVIVVHHHHS-TT-EEEaaaabxaapxbb
1li5_A_2861li5   A292303FLMSGHYRSQLNHHHSS-TTS-EEaaaabpaaxxbx
1mwm_A_1491mwm   A156167VLQELDELDSLLHHTTS-TT-EEEaaaaxxaaxbxb
1nvm_A_1771nvm   A187198FKAVLKPETQVGHHHHS-TTSEEEaaaaxxaaxxbb
1o9g_A_1901o9g   A200211LASALPAHAVIAHHHHS-TT-EEEaaaabxaaxbbb
7mdh_A_1407mdh   A158169LNAVASKNVKVLHHHHS-TT-EEEaaaaxpaaxxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fc4_A_1191fc4   A     MSESELENOMETHIONINE F - 119
1fc4_A_1191fc4   A     MSESELENOMETHIONINE D - 132
1jtk_A_871jtk   A     ZNZINC ION G - 87
1jtk_A_871jtk   A     THUTETRAHYDRODEOXYURIDINE G - 87
1jtk_A_871jtk   A     ZNZINC ION A - 88
1jtk_A_871jtk   A     ZNZINC ION C - 89
1jtk_A_871jtk   A     THUTETRAHYDRODEOXYURIDINE C - 89
1jtk_A_871jtk   A     ZNZINC ION R - 90
1mwm_A_1491mwm   A     MGMAGNESIUM ION D - 170
1mwm_A_1491mwm   A     ADPADENOSINE-5'-DIPHOSPHATE D - 170
1mwm_A_1491mwm   A     ADPADENOSINE-5'-DIPHOSPHATE L - 171
1nvm_A_1771nvm   A     MPD2-METHYL-2,4-PENTANEDIOL M - 177
1nvm_A_1771nvm   A     MPD2-METHYL-2,4-PENTANEDIOL D - 179
1nvm_A_1771nvm   A     MNMANGANESE (II) ION H - 200
1nvm_A_1771nvm   A     OXLOXALATE ION H - 200
1o9g_A_1901o9g   A     MSESELENOMETHIONINE V - 209
1o9g_A_1901o9g   A     MSESELENOMETHIONINE I - 210
1o9g_A_1901o9g   A     MSESELENOMETHIONINE A - 211
1o9g_A_1901o9g   A     MSESELENOMETHIONINE V - 212
7mdh_A_1407mdh   A     ZNZINC ION V - 170

Clusters included in this Subclass
CLUSTER: HE.5.40
CLUSTER: HE.6.108
CLUSTER: HE.6.111
CLUSTER: HE.6.58