Information on SUBCLASS 2.12.1 |
Subclass Accession number: 3741
Subclass: 2.12.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0004872 (>50 %) GO:0004888 (>50 %) GO:0016462 (>50 %) GO:0016817 (>50 %) GO:0016818 (>50 %) SCOP : 48942 (>75 %) 51268 (>50 %) 51283 (>50 %) 51284 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 54.0 +/- 7.8 Average RMSD (Å) : 0.367 +/- 0.115 Consensus geometry
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Consensus Sequence: | FpPPXh |
(φψ)-conformation: | bbwpbb |
Pattern: | [N] | [IV] | [L] | x | [C] | [FY] | [IV] | [DT] | [KQ] | [F] | [HST] | [P] | [P] | [HV] | [IV] | [EN] | [IV] | [QT] | [MW] | [L] | [KR] |
Conservation: | 1.000 | -0.201 | 0.028 | -1.449 | 2.458 | 0.383 | -0.215 | -0.808 | -0.456 | 1.000 | -1.215 | 1.486 | 1.486 | -1.228 | -0.215 | -0.566 | -0.215 | -0.941 | -0.143 | 0.028 | -0.214 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fng_A_103 | 1fng | A | 103 | 123 | NILICFIDKFSPPVVNVTWLR | EEEEEEEEEEBSS--EEEEEE | bbxbbxbblbbwxbbbbbxbb |
1fv1_A_103 | 1fv1 | A | 103 | 123 | NVLICFIDKFTPPVVNVTWLR | EEEEEEEEEEBSS--EEEEEE | bbxbbbbblbbwxbbbbbbbb |
1lk2_B_21 | 1lk2 | B | 21 | 41 | NILNCYVTQFHPPHIEIQMLK | EEEEEEEEEEBSS--EEEEEE | bbbbbbbbvbbwwxbbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fng_A_103 | 1fng | A | NAGN-ACETYL-D-GLUCOSAMINE | V - 116 |
1fng_A_103 | 1fng | A | NAGN-ACETYL-D-GLUCOSAMINE | V - 117 |
1fng_A_103 | 1fng | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 118 |
1lk2_B_21 | 1lk2 | B | MPD2-METHYL-2,4-PENTANEDIOL | L - 23 |
1lk2_B_21 | 1lk2 | B | MPD2-METHYL-2,4-PENTANEDIOL | F - 30 |
1lk2_B_21 | 1lk2 | B | PO4PHOSPHATE ION | P - 33 |
1lk2_B_21 | 1lk2 | B | MPD2-METHYL-2,4-PENTANEDIOL | P - 33 |
1lk2_B_21 | 1lk2 | B | PO4PHOSPHATE ION | H - 34 |
1lk2_B_21 | 1lk2 | B | MPD2-METHYL-2,4-PENTANEDIOL | H - 34 |
1lk2_B_21 | 1lk2 | B | PO4PHOSPHATE ION | I - 35 |
1lk2_B_21 | 1lk2 | B | MPD2-METHYL-2,4-PENTANEDIOL | I - 35 |
Clusters included in this Subclass |
CLUSTER: AR.5.281 |