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PDB code:

Information on SUBCLASS 3.2.4

Subclass Accession number: 3769 Subclass: 3.2.4 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates:

Number of loops: 25 Average sequence ID (%) : 13.6 +/- 16.6 Average RMSD (Å) : 0.484 +/- 0.253 Consensus geometry d (Å): 7 delta (°): 45-90 theta (°): 45-90 rho (°): 90-135

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1bbz_A_44	1bbz	A	47	55	WVPSNYITP.	EEEGGGEEE.	xbxaaabbx.
1cka_A_179	1cka	A	181	188	MIPVPYVE..	EEEGGGEE..	xbxaaabb..
1csk_A_57	1csk	A	59	66	IIPANYVQ..	EEETTSEE..	xbxaaabb..
1g38_A_404	1g38	A	404	412	PVRREYGFH.	EE-TTTEEE.	wbxaaabbx.
1g43_A_36	1g43	A	36	44	.INLADLKLR	.EEGGGEEEE	.bxaaaxbbb
1g8l_A_110	1g8l	A	111	120	VVMQEQTEQM	EEEGGGEEEE	bbxaaabbxb
1gcq_A_201	1gcq	A	204	212	MFPRNYVTP.	EEEGGGEEE.	xbxaaabbx.
1gcq_C_646	1gcq	C	649	657	WFPCNRVHP.	EEEGGGEEE.	bbxaaabbp.
1hxr_A_113	1hxr	A	114	122	YVALERVSH.	EEEGGGEEE.	bbxaaabbb.
1iq8_A_526	1iq8	A	526	534	.VFAKFVIFA	.EEGGGEEEE	.bxaaaxabb
1jb0_E_57	1jb0	E	59	67	NFALHEVQE.	EE-GGGEEE.	bbxaaabbx.
1jo8_A_46	1jo8	A	48	56	LFPSNYVSL.	EEEGGGEEE.	xbxaaabbp.
1ki1_B_1519	1ki1	B	1519	1527	.IFLNEVLVK	.EEGGGEEEE	.xxaaabbbb
1l1d_A_428	1l1d	A	429	436	LFSSADKY..	EEEGGGEE..	abbaaaxb..
1lck_A_108	1lck	A	110	118	FIPFNFVAK.	EEEGGGEEE.	xbxaaabbp.
1mai_*_66	1mai	-	66	75	LFSIEDIQEV	EEEGGGEEEE	bbxaaababb
1nba_A_191	1nba	A	193	200	IIPRETIG..	EEEGGGEE..	bbxaaabb..
1nbc_A_32	1nbc	A	32	40	.IDLSKLTLR	.EEGGGEEEE	.bxaaabbbb
1ng2_A_271	1ng2	A	274	282	YFPSMYLQK.	EEEGGGEEE.	xbxaaabbp.
1ntv_A_104	1ntv	A	107	116	HHAVHEISYI	EE-GGGEEEE	bbxaaaxabb
1p3r_A_112	1p3r	A	115	124	EHPVNKISFI	EE-GGGEEEE	bbxaaaxabb
1p5t_A_48	1p5t	A	53	62	FWPYTLLRRY	EEEGGGEEEE	bbpaaaxabb
1uj0_A_247	1uj0	A	250	257	LFPSNFVT..	EEEGGGEE..	xbxaaabb..
1uz5_A_113	1uz5	A	114	123	VIQFEDVERV	EEEGGGEEEE	bxpaaabbxb
2mcm_*_81	2mcm	-	85	94	TVNCKVVSCS	EEETTTS-EE	xbbaaabxbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1g43_A_36	1g43	A	CACALCIUM ION	Y - 47
1gcq_A_201	1gcq	A	MPD2-METHYL-2,4-PENTANEDIOL	Q - 201
1iq8_A_526	1iq8	A	MGMAGNESIUM ION	A - 528
1iq8_A_526	1iq8	A	MGMAGNESIUM ION	K - 529
1iq8_A_526	1iq8	A	MGMAGNESIUM ION	F - 530
1iq8_A_526	1iq8	A	MGMAGNESIUM ION	V - 531
1iq8_A_526	1iq8	A	MGMAGNESIUM ION	I - 532
1jo8_A_46	1jo8	A	SULSULFATE ANION	V - 54
1jo8_A_46	1jo8	A	SULSULFATE ANION	S - 55
1jo8_A_46	1jo8	A	SULSULFATE ANION	L - 56
1nbc_A_32	1nbc	A	CACALCIUM ION	Y - 43
1p5t_A_48	1p5t	A	MSESELENOMETHIONINE	G - 63
1uj0_A_247	1uj0	A	PO4PHOSPHATE ION	V - 256
1uj0_A_247	1uj0	A	PO4PHOSPHATE ION	T - 257
2mcm_*_81	2mcm	*	CACALCIUM ION	W - 83
2mcm_*_81	2mcm	*	MPD2-METHYL-2,4-PENTANEDIOL	S - 92
2mcm_*_81	2mcm	*	MPD2-METHYL-2,4-PENTANEDIOL	C - 93
2mcm_*_81	2mcm	*	MPD2-METHYL-2,4-PENTANEDIOL	S - 94
2mcm_*_81	2mcm	*	MPD2-METHYL-2,4-PENTANEDIOL	A - 95
2mcm_*_81	2mcm	*	MPD2-METHYL-2,4-PENTANEDIOL	G - 96
2mcm_*_81	2mcm	*	MPD2-METHYL-2,4-PENTANEDIOL	L - 97
2mcm_*_81	2mcm	*	MPD2-METHYL-2,4-PENTANEDIOL	G - 98

Clusters included in this Subclass

CLUSTER: AR.2.42

CLUSTER: AR.4.24

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