Information on SUBCLASS 5.16.1 |
Subclass Accession number: 377
Subclass: 5.16.1 ![]() Type: HE alpha-beta DB: ArchDB40 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 5 Average sequence ID (%) : 21.9 +/- 20.0 Average RMSD (Å) : 0.620 +/- 0.164 Consensus geometry
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Consensus Sequence: | pXLhXGXKh |
(φψ)-conformation: | aapppgpbb |
Pattern: | x | [ail] | x | [KNQRT] | [filv] | [AKL] | [AEKQ] | [ADKQ] | [L] | [gp] | [EHP] | [GT] | [ade] | [KV] | [FILMV] | x |
Conservation: | -1.308 | -0.445 | -1.196 | -0.114 | -0.723 | -0.589 | 0.217 | -0.550 | 2.464 | 0.181 | 0.270 | 1.558 | -0.523 | 1.022 | 0.351 | -0.615 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bed_*_31 | 1bed | - | 39 | 54 | IIAQLKQQLPEGAKFQ | HHHHHHHTS-TT-EEE | aaaaaaaaxxpgxbbb |
1fvk_A_42 | 1fvk | A | 42 | 57 | ISDNVKKKLPEGVKMT | HHHHHHTTS-TT--EE | aaaaaaaaxxxvxbbb |
1ogc_A_9 | 1ogc | A | 10 | 25 | HLAKILADLGHTDKIV | HHHHHHHH--TT-EEE | aaaaaaaapbpvxbbb |
1qj4_A_59 | 1qj4 | A | 60 | 75 | PLLTFLEALPPGEKVI | HHHHHHHTS-TT--EE | aaaaaaaaxxpvxbbb |
1v6s_A_94 | 1v6s | A | 95 | 110 | EARREAEALRPGEVLL | HHHHHHHT--TT-EEE | aaaaaaaaxbpvxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qj4_A_59 | 1qj4 | A | GOLGLYCEROL | E - 79 |
Clusters included in this Subclass |
CLUSTER: HE.5.175 |
CLUSTER: HE.6.78 |
CLUSTER: HE.7.38 |