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Information on SUBCLASS 5.16.1
Subclass Accession number: 377
Subclass: 5.16.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 21.9 +/- 20.0
Average RMSD (Å) : 0.620 +/- 0.164

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: pXLhXGXKh
(φψ)-conformation: aapppgpbb
Pattern: x[ail]x[KNQRT][filv][AKL][AEKQ][ADKQ][L][gp][EHP][GT][ade][KV][FILMV]x
Conservation:-1.308-0.445-1.196-0.114-0.723-0.5890.217-0.5502.4640.1810.2701.558-0.5231.0220.351-0.615
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bed_*_311bed   -3954IIAQLKQQLPEGAKFQHHHHHHHTS-TT-EEEaaaaaaaaxxpgxbbb
1fvk_A_421fvk   A4257ISDNVKKKLPEGVKMTHHHHHHTTS-TT--EEaaaaaaaaxxxvxbbb
1ogc_A_91ogc   A1025HLAKILADLGHTDKIVHHHHHHHH--TT-EEEaaaaaaaapbpvxbbb
1qj4_A_591qj4   A6075PLLTFLEALPPGEKVIHHHHHHHTS-TT--EEaaaaaaaaxxpvxbbb
1v6s_A_941v6s   A95110EARREAEALRPGEVLLHHHHHHHT--TT-EEEaaaaaaaaxbpvxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1qj4_A_591qj4   A     GOLGLYCEROL E - 79

Clusters included in this Subclass
CLUSTER: HE.5.175
CLUSTER: HE.6.78
CLUSTER: HE.7.38