Information on SUBCLASS 3.2.8 |
Subclass Accession number: 3773
Subclass: 3.2.8 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 13.3 +/- 19.9 Average RMSD (Å) : 0.913 +/- 0.155 Consensus geometry
|
Consensus Sequence: | hXXXphp |
(φψ)-conformation: | bbaaabb |
Pattern: | [gqrs] | [amvy] | x | [GWY] | [dgnrs] | [ADEP] | [agknqs] | [knst] | [ACILV] | x | x |
Conservation: | -0.629 | -0.265 | -0.886 | 2.525 | -0.533 | 0.140 | -0.574 | 0.128 | 0.647 | -0.554 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1flj_A_47 | 1flj | A | 48 | 58 | SVSYDPGSAKT | EEE--GGGEEE | bbbxxaaaxab |
1hcb_*_47 | 1hcb | - | 48 | 58 | SVSYNPATAKE | EEE--GGGEEE | bbbbbaaaxab |
1hyo_A_158 | 1hyo | A | 158 | 168 | GYHGRASSIVV | EEE--STTEEE | bbxxxaaaxbx |
1jr7_A_239 | 1jr7 | A | 240 | 249 | VMRYIDQFVQ. | EE---TTTEE. | bbbbbaaaxb. |
1keq_A_45 | 1keq | A | 48 | 58 | RVSYDAASCRY | EEE--GGGEEE | xbbbbaaaxab |
1ocv_A_109 | 1ocv | A | 113 | 123 | RALWGEKNIHA | EEE--GGGEEE | bbbbbaaabbx |
1oh0_A_113 | 1oh0 | A | 117 | 126 | QAYWSEVNLS. | EEE--GGGEE. | bbxbbaaaxb. |
1svb_*_126 | 1svb | - | 129 | 139 | GHVYDANKIVY | EEE--TTT-EE | bbbxbaaaxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1flj_A_47 | 1flj | A | GTTGLUTATHIONE | W - 47 |
1flj_A_47 | 1flj | A | GTTGLUTATHIONE | V - 49 |
1flj_A_47 | 1flj | A | GTTGLUTATHIONE | Y - 51 |
1flj_A_47 | 1flj | A | GTTGLUTATHIONE | P - 53 |
1hyo_A_158 | 1hyo | A | CACALCIUM ION | Y - 159 |
1hyo_A_158 | 1hyo | A | HBU4-[HYDROXY-[METHYL-PHOSPHINOYL]]-3-OXO-BUTANOIC ACID | Y - 159 |
1oh0_A_113 | 1oh0 | A | EQUEQUILENIN | M - 116 |
1oh0_A_113 | 1oh0 | A | EQUEQUILENIN | A - 118 |
1oh0_A_113 | 1oh0 | A | EQUEQUILENIN | W - 120 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1oh0_A_113 | 1oh0 | A | AC1EQU BINDING SITE FOR CHAIN A | M - 116 |
1oh0_A_113 | 1oh0 | A | AC1EQU BINDING SITE FOR CHAIN A | W - 120 |
Clusters included in this Subclass |
CLUSTER: AR.4.121 |
CLUSTER: AR.5.110 |
CLUSTER: AR.6.60 |