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Information on SUBCLASS 5.17.1
Subclass Accession number: 378
Subclass: 5.17.1 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.8 (>75 %)  2.8.2 (>75 %)  2.8.2.4
GO : GO:0004304 (>75 %)  GO:0005496 (>75 %)  GO:0008146 (>75 %)  GO:0016782 (>75 %)  
SCOP : 52539 (>75 %)  52540 (>75 %)  52575 (>75 %)  
 Number of loops: 3

Average sequence ID (%) : 12.3 +/- 12.0
Average RMSD (Å) : 0.900 +/- 0.173

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 0-45
Consensus Sequence: XhhcpXXXh
(φψ)-conformation: aapbplppb
Pattern: x[ADQ][FIY][AL]x[EG][FKL][CS][AGK][FIV][AIL][GK][DES][GR]xx[LV][LTV][IT]
Conservation:-0.713-0.8811.1270.226-0.5460.585-1.5501.128-0.8810.625-0.3790.5850.7921.010-0.881-2.0521.609-0.2110.407
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1gde_A_981gde   A98116QAFLMGLSAFLKDGEEVLIHHHHHHHTTT--TT-EEEEaaaaaaaaaNpbpvxxbxb
1o5z_A_1781o5z   A179197EQIAWEKSGIIKERVPLVTHHHHHHHGGG--TT--EEEaaaaaaaaaaxbpvxxbbb
1rwz_A_1951rwz   A195213VDYLKEFCKVAGSGDLLTIHHHHHHHGGG--TT-EEEEaaaaaaaaaabbpvxxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gde_A_981gde   A     PLPPYRIDOXAL-5'-PHOSPHATE Q - 98
1gde_A_981gde   A     PLPPYRIDOXAL-5'-PHOSPHATE F - 100

Clusters included in this Subclass
CLUSTER: HE.8.33