Logo
Information on SUBCLASS 3.5.1
Subclass Accession number: 3795
Subclass: 3.5.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 34

Average sequence ID (%) : 13.2 +/- 16.8
Average RMSD (Å) : 0.579 +/- 0.155

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 0-45
Consensus Sequence: XhXcpXh
(φψ)-conformation: bbplpbb
Pattern: xxxxx[degnst][dehqst][adgnpstv][afgilmpvy]x
Conservation:-1.000-0.206-0.221-0.771-0.9472.3260.417-0.3090.444-0.734
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aac_*_351aac   -3544LHVKVGDTVTEEEE-TT-EEbbbbpvxbbb
1aoz_A_2261aoz   A228237NFAIGNHQLLEEEETT--EEbbbbxUbxbb
1aoz_A_4451aoz   A446455PWHLHGHDFWEEEETT--EEwbbbxvbbbx
1ay1_H_111ay1   H1119.LVKPYQSLS.EE-TTS-EE.bbxxvxbbb
1b2p_A_161b2p   A1624.ILHATESLE.EEETT-EEE.bbxpvxbxb
1cdy_*_1071cdy   -107115.HLLQGQSLT.EEETT--EE.bbxpvxbbb
1cs6_A_2221cs6   A223232TYALTGQMVTEEEETT--EEbbbbpvxbbb
1cwv_A_8171cwv   A817825.TIFKNATFQ.EEETT-EEE.bbbpvxbbb
1cyx_*_1521cyx   -153162IAFPANTPVYEEEETTS-EEbbbpxlbwbb
1f2q_A_961f2q   A96104.VVMEGQPLF.EEETTS-EE.bbxpgxxbb
1g1c_A_151g1c   A1524QTVGQGSDAHEEEETTS-EEbbbxpgxbxb
1gtt_A_451gtt   A4553.VIGCGEPIP.EE-TT--EE.xbxpvxxxx
1gw0_A_2381gw0   A239248QVSLVNHTMTEEEETTB-EEbbbbpUbbbb
1gw0_A_4311gw0   A432441PMHLHGHDFLEEEETTS-EExxbbxvbbxb
1gyc_A_2091gyc   A210219TFSIDGHNLTEEEETT--EEbbbbpvbxbb
1hfu_A_2081hfu   A209218QFSIDGHELTEEEETT--EExbbbpvbbbx
1hfu_A_3971hfu   A397406PFHLHGHAFSEEEETT--EExxbbxvbxbx
1ijq_A_4871ijq   A490499LFRENGSKPREEE-TT--EEabbbxvxbxa
1kj1_A_31kj1   A311.LLTNGEGLY.EEETT-EEE.bbbpvxbbx
1kj1_A_91kj1   A917.GLYAGQSLD.EEETT-EEE.bbxpvxbbb
1kj1_D_31kj1   D311.ILMNDEGLY.EEETT-EEE.bbbpvbbbx
1kya_A_2091kya   A210219TFSIDGHNMTEEEETT--EExxbbpvbxbb
1kya_A_3961kya   A396405PFHLHGHAFAEEEESS--EExxbbxvbbbx
1l0q_A_3171l0q   A317325.YIFLSEPVQ.EEETT--EE.bbxpvxxbb
1nep_A_281nep   A2837CKLHRGQSYSEEEETT-EEExbbxxvbbxb
1o7f_A_3551o7f   A358367SHAKGGTVLFEE-STT-EEEbbabxvxxab
1oe1_A_2481oe1   A248256.PHLIGGHGD.EEETT--EE.wbbxvbbxa
1oe1_A_671oe1   A6776LVVHEGDYVQEEEETT-EEEbbbbpvxbxb
1pmi_*_4101pmi   -411420FFVAPGSSIEEEE-TT--EEbxbxpvxxbb
1qb0_A_4361qb0   A436442..HIKTAVN...EETT-EE...bxpvxbx.
1rhs_*_2031rhs   -203209..HIRGSVN...EETT-EE...bxpvxbb.
1ry2_A_4961ry2   A496504.FPFFGIDAV.EE-TT--EE.bpxxvxbxb
1uyr_A_17461uyr   A17461755AIQVEGQPIIEEEETT--EEbbbxpvbxbb
1v54_B_1421v54   B142151VVLPMEMTIREEEETTS-EExxbxxlbxbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aoz_A_4451aoz   A     CUCOPPER (II) ION H - 445
1aoz_A_4451aoz   A     CUCOPPER (II) ION P - 446
1aoz_A_4451aoz   A     CUCOPPER (II) ION W - 447
1aoz_A_4451aoz   A     CUCOPPER (II) ION H - 448
1aoz_A_4451aoz   A     C2OCU-O-CU LINKAGE H - 448
1aoz_A_4451aoz   A     C1OCU-O LINKAGE H - 448
1aoz_A_4451aoz   A     CUCOPPER (II) ION L - 449
1aoz_A_4451aoz   A     C1OCU-O LINKAGE L - 449
1aoz_A_4451aoz   A     CUCOPPER (II) ION H - 450
1aoz_A_4451aoz   A     C2OCU-O-CU LINKAGE H - 450
1aoz_A_4451aoz   A     C1OCU-O LINKAGE H - 450
1aoz_A_4451aoz   A     CUCOPPER (II) ION G - 451
1aoz_A_4451aoz   A     C1OCU-O LINKAGE G - 451
1gw0_A_2381gw0   A     NAGN-ACETYL-D-GLUCOSAMINE S - 241
1gw0_A_2381gw0   A     NAGN-ACETYL-D-GLUCOSAMINE V - 243
1gw0_A_4311gw0   A     CUCOPPER (II) ION H - 431
1gw0_A_4311gw0   A     CUCOPPER (II) ION P - 432
1gw0_A_4311gw0   A     O2OXYGEN MOLECULE H - 434
1gw0_A_4311gw0   A     CUCOPPER (II) ION H - 434
1gw0_A_4311gw0   A     CUCOPPER (II) ION L - 435
1gw0_A_4311gw0   A     O2OXYGEN MOLECULE H - 436
1gw0_A_4311gw0   A     CUCOPPER (II) ION H - 436
1gyc_A_2091gyc   A     NAGN-ACETYL-D-GLUCOSAMINE G - 215
1gyc_A_2091gyc   A     NAGN-ACETYL-D-GLUCOSAMINE H - 216
1gyc_A_2091gyc   A     NAGN-ACETYL-D-GLUCOSAMINE N - 217
1gyc_A_2091gyc   A     NAGN-ACETYL-D-GLUCOSAMINE T - 219
1hfu_A_3971hfu   A     CUCOPPER (II) ION P - 397
1hfu_A_3971hfu   A     CUCOPPER (II) ION F - 398
1hfu_A_3971hfu   A     CUCOPPER (II) ION H - 399
1hfu_A_3971hfu   A     CUCOPPER (II) ION H - 401
1kj1_A_31kj1   A     MANALPHA-D-MANNOSE T - 5
1kj1_D_31kj1   D     MANALPHA-D-MANNOSE M - 5
1kya_A_2091kya   A     NAGN-ACETYL-D-GLUCOSAMINE I - 213
1kya_A_2091kya   A     NAGN-ACETYL-D-GLUCOSAMINE D - 214
1kya_A_3961kya   A     CUCOPPER (II) ION P - 396
1kya_A_3961kya   A     CUCOPPER (II) ION F - 397
1kya_A_3961kya   A     CUCOPPER (II) ION H - 398
1kya_A_3961kya   A     CUCOPPER (II) ION L - 399
1kya_A_3961kya   A     CUCOPPER (II) ION H - 400
1kya_A_3961kya   A     CUCOPPER (II) ION G - 401
1kya_A_3961kya   A     NAGN-ACETYL-D-GLUCOSAMINE R - 408
1nep_A_281nep   A     NAGN-ACETYL-D-GLUCOSAMINE N - 39
1nep_A_281nep   A     NAGN-ACETYL-D-GLUCOSAMINE T - 41
1oe1_A_671oe1   A     PCAPYROGLUTAMIC ACID Y - 74
1oe1_A_2481oe1   A     PG4TETRAETHYLENE GLYCOL I - 251
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gw0_A_4311gw0   A AC2CU BINDING SITE FOR CHAIN AH - 431
1gw0_A_4311gw0   A AC1O2 BINDING SITE FOR CHAIN AH - 434
1gw0_A_4311gw0   A AC1O2 BINDING SITE FOR CHAIN AH - 436
1gyc_A_2091gyc   A NA3NAG BINDING SITE FOR CHAIN AG - 215
1gyc_A_2091gyc   A NA3NAG BINDING SITE FOR CHAIN AN - 217
1hfu_A_3971hfu   A T3TYPE 3 CU BINDING SITE.H - 399
1hfu_A_3971hfu   A T3TYPE 3 CU BINDING SITE.H - 401

Clusters included in this Subclass
CLUSTER: AR.2.145
CLUSTER: AR.3.38
CLUSTER: AR.4.23
CLUSTER: AR.5.17