Information on SUBCLASS 4.3.1 |
Subclass Accession number: 38
Subclass: 4.3.1 Type: EH beta-alpha DB: ArchDB-KI |
Number of loops: 4 Average sequence ID (%) : 26.3 +/- 0.2 Average RMSD (Å) : 0.47 +/- 0.07 Consensus geometry
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Consensus Sequence: | VDhppPhX |
(φψ)-conformation: | bpaappaa |
Pattern: | {ALY} | {MV} | [V] | [D] | [AGI] | [DST] | [KQ] | [PS] | [ILPV] | [AE] | {AG} | [IV] | x | {AC} | [DES] | [ILT] | x | {EKQ} | [ILTV] |
Conservation: | -1.159 | -0.462 | 1.393 | 2.710 | -0.715 | -0.063 | 0.734 | 0.981 | -0.624 | -0.077 | -0.491 | 1.124 | -1.042 | -0.547 | 0.375 | -0.183 | -1.118 | -0.624 | -0.213 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e4y_A_193 | 1e4y | A | 194 | 212 | AKVDGTKPVAEVRADLEKI | EEEETTS-HHHHHHHHHHH | bbbxaaxpaaaaaaaaaaa |
1e6c_A_149 | 1e6c | A | 149 | 167 | YVVDATQPPAAIVCELMQT | EEEETTS-HHHHHHHHHHH | bbbxaaxxaaaaaaaaaaa |
1e9e_A_175 | 1e9e | A | 176 | 194 | KMVDASKSIEAVHEDIRVL | EEEETTS-HHHHHHHHHHH | bxbxaaxxaaaaaaaaaaa |
1knq_A_151 | 1knq | A | 152 | 170 | LVVDIDQPLEGVVASTIEV | EEEE-SS-HHHHHHHHHHH | bbbxaxbxaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1e4y_A_193 | 1e4y | A | AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE | D - 197 |
1e4y_A_193 | 1e4y | A | AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE | G - 198 |
1e4y_A_193 | 1e4y | A | AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE | T - 199 |
1e4y_A_193 | 1e4y | A | AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE | K - 200 |
1e4y_A_193 | 1e4y | A | AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE | P - 201 |
1e4y_A_193 | 1e4y | A | AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE | V - 202 |
1e4y_A_193 | 1e4y | A | AP5BIS(ADENOSINE)-5'-PENTAPHOSPHATE | V - 205 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e4y_A_193 | 1e4y | A | AC1AP5 BINDING SITE FOR CHAIN A | K - 200 |
Bibliographic annotations |
Loop | PDB | Chain | Annotation | Residue |
1knq_A_151 | 1knq RefL.KRAFT,G.A.SPRENGER,Y.LINDQVIST. CONFORMATIONAL CHANGES DURING THE CATALYTIC CYCLE OF GLUCONATE KINASE AS REVEALED BY X-RAY CRYSTALLOGRAPHY J.MOL.BIOL. v.318;1057,2002 | A | ATP BINDING RESIDUE | L - 160 |
Clusters included in this Subclass |
CLUSTER: EH.3.5 |