Information on SUBCLASS 5.23.1 |
Subclass Accession number: 384
Subclass: 5.23.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.1 (>75 %) 1.1.1 (>75 %) 1.1.1.1 (>75 %) 2.5 (>75 %) 2.5.1 (>75 %) 2.5.1.16 GO : GO:0004022 (>50 %) GO:0004766 (>75 %) GO:0008168 (>75 %) GO:0008270 (>50 %) GO:0008757 (>75 %) GO:0016614 (>50 %) GO:0016616 (>50 %) GO:0016741 (>75 %) GO:0016765 (>75 %) GO:0046914 (>50 %) SCOP : 51734 (>75 %) 51735 (>75 %) 51736 (>75 %) 53334 (>75 %) 53335 (>75 %) 69557 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 34.8 +/- 31.7 Average RMSD (Å) : 0.625 +/- 0.386 Consensus geometry
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Consensus Sequence: | XXpXchcXV |
(φψ)-conformation: | aapabpabb |
Pattern: | [fry] | x | [EY] | [HW] | [ES] | [MPT] | [l] | [AIV] | [EH] | [NPV] | [APV] | [LM] | [FKL] | [alt] | [HY] | [PR] | [EKN] | [IP] | [KN] | [AKR] | [V] | [LV] |
Conservation: | -1.208 | -1.255 | 0.311 | 1.216 | 0.309 | -0.662 | -0.681 | -0.192 | 1.302 | -1.240 | -0.824 | 1.003 | -1.142 | -1.302 | 2.198 | 0.311 | 0.084 | -0.137 | 0.512 | -0.364 | 1.400 | 0.359 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1inl_A_73 | 1inl | A | 74 | 95 | FMYHEMLAHVPMFLHPNPKKVL | HHHHHHHHHHHHHHSSS--EEE | aaaaaaaaaaaaaaxabxabbb |
1mjf_A_58 | 1mjf | A | 58 | 79 | RSYHEPLVHPAMLAHPKPKRVL | HHHHHHHHHHHHHHSS---EEE | aaaaaaaaaaaaaaxabxabbb |
1uir_A_60 | 1uir | A | 61 | 82 | YIYHETLVHPAMLTHPEPKRVL | HHHHHHHHHHHHHHSS---EEE | aaaaaaaaaaaaaaxabxabbb |
2bc2_A_186 | 2bc2 | A | 186 | 207 | VNEWSTSIENVLKRYRNINAVV | HHHHHHHHHHHHHH-SS---EE | aaaaaaaaaaaaaababxaxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
2bc2_A_186 | 2bc2 | A | CSD3-SULFINOALANINE | W - 189 |
Clusters included in this Subclass |
CLUSTER: HE.5.125 |