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Information on SUBCLASS 3.18.1
Subclass Accession number: 3854
Subclass: 3.18.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 12

Average sequence ID (%) : 20.5 +/- 23.1
Average RMSD (Å) : 0.675 +/- 0.245

Consensus geometry
d (Å): 13 delta (°): 0-45 theta (°): 45-90 rho (°): 180-225
Consensus Sequence: XhGpXXX
(φψ)-conformation: bbeppbb
Pattern: xxx[agilmv][G][aegnst][anptv]x[akltv]
Conservation:-1.000-0.445-0.573-0.4172.443-0.015-0.326-0.335-0.333
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bx4_A_91bx4   A917LFGMGNPLLEEEE---EEbbbbexwbx
1cgt_*_6591cgt   -660668TWESGSNHTEE--SS-EEbxxxexpxb
1kcl_A_6591kcl   A661669TWEGGSNHTEE--SS-EEbxxxexxxb
1khu_A_2811khu   A281288.NRVGEAFH.EE-S--EE.bxbexxbb
1khx_A_2841khx   A284291.QRVGETFH.EE-S--EE.bxbexxbb
1lo7_A_561lo7   A5662..IVGTPIV..EEE--EE..xaebxxa
1pam_A_6591pam   A661669TWEGGANRTEE--SS-EEbxxxexxxb
1qho_A_6601qho   A661669QWENGSNHVEE--SS-EEbxxxexxxb
1rkd_*_61rkd   -715LVVLGSINAEEEE---EEbbbbexbbx
1tii_A_1321tii   A132139.AIEGGMHR.EE-SS-EE.bxxexxxx
1v1a_A_41v1a   A412VVTAGEPLVEEEES--EEbbbbexwbb
1vk4_A_31vk4   A310.TFIGHVSK.EEE---EE.bbbexxbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bx4_A_91bx4   A     ADNADENOSINE N - 14
1bx4_A_91bx4   A     ADNADENOSINE L - 16
1bx4_A_91bx4   A     ADNADENOSINE L - 17
1bx4_A_91bx4   A     ADNADENOSINE D - 18
1kcl_A_6591kcl   A     GLCGLUCOSE W - 662
1kcl_A_6591kcl   A     GLCGLUCOSE E - 663
1kcl_A_6591kcl   A     GLCGLUCOSE G - 664
1kcl_A_6591kcl   A     GLCGLUCOSE G - 665
1kcl_A_6591kcl   A     GLCGLUCOSE N - 667
1lo7_A_561lo7   A     4CO4-HYDROXYPHENACYL COENZYME A V - 57
1lo7_A_561lo7   A     4CO4-HYDROXYPHENACYL COENZYME A G - 58
1lo7_A_561lo7   A     4CO4-HYDROXYPHENACYL COENZYME A T - 59
1lo7_A_561lo7   A     4CO4-HYDROXYPHENACYL COENZYME A P - 60
1lo7_A_561lo7   A     4CO4-HYDROXYPHENACYL COENZYME A I - 61
1lo7_A_561lo7   A     4CO4-HYDROXYPHENACYL COENZYME A V - 62
1lo7_A_561lo7   A     4CO4-HYDROXYPHENACYL COENZYME A S - 63
1lo7_A_561lo7   A     EGLETHYLENE GLYCOL N - 65
1lo7_A_561lo7   A     EGLETHYLENE GLYCOL A - 66
1lo7_A_561lo7   A     EGLETHYLENE GLYCOL S - 67
1lo7_A_561lo7   A     EGLETHYLENE GLYCOL F - 68
1qho_A_6601qho   A     MALMALTOSE W - 662
1qho_A_6601qho   A     MALMALTOSE E - 663
1qho_A_6601qho   A     MALMALTOSE N - 664
1qho_A_6601qho   A     MALMALTOSE G - 665
1qho_A_6601qho   A     MALMALTOSE N - 667
1rkd_*_61rkd   *     RIBRIBOSE S - 12
1rkd_*_61rkd   *     RIBRIBOSE N - 14
1rkd_*_61rkd   *     RIBRIBOSE A - 15
1rkd_*_61rkd   *     RIBRIBOSE D - 16
1rkd_*_61rkd   *     PO4PHOSPHATE ION H - 17
1v1a_A_41v1a   A     KDG2-KETO-3-DEOXYGLUCONATE E - 9
1v1a_A_41v1a   A     KDG2-KETO-3-DEOXYGLUCONATE L - 11
1vk4_A_31vk4   A     MSESELENOMETHIONINE T - 3
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1rkd_*_61rkd   * RB1RESIDUES MAKING DIRECT HYDROGEN BONDS WITH RIBOSE.N - 14
1rkd_*_61rkd   * RB1RESIDUES MAKING DIRECT HYDROGEN BONDS WITH RIBOSE.D - 16
1v1a_A_41v1a   A AC1KDG BINDING SITE FOR CHAIN AL - 11

Clusters included in this Subclass
CLUSTER: AR.3.95
CLUSTER: AR.4.57