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Information on SUBCLASS 4.2.7
Subclass Accession number: 3882
Subclass: 4.2.7 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 12.5 +/- 14.7
Average RMSD (Å) : 0.660 +/- 0.182

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: phpXGpph
(φψ)-conformation: bbpplpbb
Pattern: x[AFIL][EGNST][dnpq][GN][DET]x[FIVY]
Conservation:-0.956-0.304-0.243-0.8972.1040.450-0.5700.416
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1i5p_A_5881i5p   A596603VASDNTNVEE-TTSEEbxpxlbxx
1i5z_A_581i5z   A6370YLNQGDFIEE-TT-EEbbbpvxxb
1jj2_J_461jj2   J4653KAGLGDKIEE-TT-EEbbbpvxxb
1o75_A_3821o75   A389396DFTPGTEYEE-TT-EEbxxpgxxb
1oxx_K_181oxx   K2734NIENGERFEE-TT-EEbxxpvxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1i5z_A_581i5z   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE E - 58
1i5z_A_581i5z   A     TRS2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL M - 59
1i5z_A_581i5z   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE M - 59
1i5z_A_581i5z   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE L - 61
1i5z_A_581i5z   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE S - 62
1i5z_A_581i5z   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE L - 64
1i5z_A_581i5z   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE F - 69
1i5z_A_581i5z   A     CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE I - 70
1oxx_K_181oxx   K     IODIODIDE ION V - 18
1oxx_K_181oxx   K     IODIODIDE ION A - 20
1oxx_K_181oxx   K     IODIODIDE ION D - 22
1oxx_K_181oxx   K     IODIODIDE ION N - 23
1oxx_K_181oxx   K     IODIODIDE ION V - 24
1oxx_K_181oxx   K     IODIODIDE ION N - 25
1oxx_K_181oxx   K     IODIODIDE ION I - 26

Clusters included in this Subclass
CLUSTER: AR.3.140