ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 4.6.4

Subclass Accession number: 3900
Subclass: 4.6.4

Type: AR beta-beta link
DB: ArchDB95

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 3.2 (>50 %)  3.2.1 (>50 %)
GO : GO:0004553 (>50 %)  GO:0016798 (>50 %)
SCOP : 49853 (>75 %)  49854 (>75 %)  49855 (>75 %)

Number of loops: 5

Average sequence ID (%) : 14.1 +/- 23.3
Average RMSD (Å) : 1.040 +/- 0.305

Consensus geometry

d (Å): 9

delta (°): 45-90

theta (°): 90-135

rho (°): 0-45

Consensus Sequence:	phXXppph
(φψ)-conformation:	bbpaapbb

Pattern:	x	[CLT]	x	[vw]	[NTV]	[GILV]	[kqt]	[CLMV]	[dgpt]	[KPS]	[DEKR]	[NQSY]	[HKT]	[GLVW]	x	x	[asv]
Conservation:	-1.648	1.789	-0.215	0.850	0.767	-0.406	-0.643	0.930	-1.289	1.233	0.980	-0.161	0.174	-1.533	-0.615	0.299	-0.512

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1bhe_*_352	1bhe	-	354	370	VTMKNVKLTSDSTWQIK	EEEEEEE--TT-EEEEE	bbbblxbbxaaxbbbbb
1s14_A_1145	1s14	A	1149	1165	DLQVVGTCGKRNTGTSV	EEEEEEE--TT--EEEE	ppbxaebbxaaxbebbb
1sfp_*_30	1sfp	-	30	46	NCVWTIQMPPEYHVRVS	EEEEEEE--TT-EEEEE	bbbbbxbbpaaxbbbbb
1spp_A_29	1spp	A	29	45	ECVWTLQVDPKYKLLVS	EEEEEEE--TTSEEEEE	bbbbbxbbxaabbxbbb
1spp_B_29	1spp	B	29	45	LCTWTILMKPDQKVRMA	EEEEEEE--TT-EEEEE	bbbbbxbbpaabbxbbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1s14_A_1145	1s14	A	NOVNOVOBIOCIN	T - 1163
1s14_A_1145	1s14	A	NOVNOVOBIOCIN	V - 1165

Clusters included in this Subclass

CLUSTER: AR.4.274

CLUSTER: AR.6.97