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Information on SUBCLASS 4.40.1
Subclass Accession number: 3972
Subclass: 4.40.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 41.7 +/- 27.9
Average RMSD (Å) : 0.800 +/- 0.346

Consensus geometry
d (Å): 21 delta (°): 0-45 theta (°): 0-45 rho (°): 90-135
Consensus Sequence: XhGpXXAh
(φψ)-conformation: bbepppbb
Pattern: [NS]xx[AGR][AV][G][NY]x[FQ][A][GM][EY]
Conservation:0.580-0.570-0.921-0.749-0.0972.5030.055-0.718-0.5691.202-0.595-0.121
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1n9e_A_4921n9e   A495506SVRAAGYIQAGYEEEE-B----EEbbbbbexxxxbx
1p2z_A_4651p2z   A465476NEIGVGNNFAMEEEE--SS---EEbxbbbexxxbbb
1p30_A_4491p30   A449460NEIRVGNNFAMEEEE--SS---EEbxbxbexxxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1n9e_A_4921n9e   A     TPQ5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE A - 498
1n9e_A_4921n9e   A     CUCOPPER (II) ION A - 498
1n9e_A_4921n9e   A     TPQ5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE A - 499
1n9e_A_4921n9e   A     CACALCIUM ION A - 499
1n9e_A_4921n9e   A     TPQ5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE G - 500
1n9e_A_4921n9e   A     CACALCIUM ION G - 500
1n9e_A_4921n9e   A     TPQ5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE Y - 501
1n9e_A_4921n9e   A     CACALCIUM ION Y - 501
1n9e_A_4921n9e   A     TPQ5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE I - 502
1n9e_A_4921n9e   A     CUCOPPER (II) ION I - 502
1n9e_A_4921n9e   A     TPQ5-(2-CARBOXY-2-AMINOETHYL)-2-HYDROXY-1,4-BENZOQUINONE Q - 503
1p2z_A_4651p2z   A     CITCITRIC ACID E - 466
1p2z_A_4651p2z   A     CITCITRIC ACID F - 473

Clusters included in this Subclass
CLUSTER: AR.7.145