Information on SUBCLASS 5.2.1 |
Subclass Accession number: 40
Subclass: 5.2.1 Type: EH beta-alpha DB: ArchDB-KI |
Number of loops: 5 Average sequence ID (%) : 61.6 +/- 4.8 Average RMSD (Å) : 0.45 +/- 0.13 Consensus geometry
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Consensus Sequence: | hNFSHGppE |
(φψ)-conformation: | bpaabebaa |
Pattern: | [IV] | [AMV] | [R] | [LM] | [N] | [F] | [S] | [H] | [G] | [DST] | [HY] | [AE] | [EY] | [H] | {AG} | [EQS] | {TV} | [I] | [DKQ] | [N] | [ALV] | [R] | {KNT} | {AV} | {ET} |
Conservation: | 0.028 | -0.885 | 0.667 | -0.096 | 1.101 | 1.101 | 0.233 | 1.969 | 1.101 | -0.779 | 0.560 | -0.634 | -0.449 | 1.969 | -1.068 | -0.627 | -1.197 | 0.233 | -0.733 | 1.101 | -0.916 | 0.667 | -1.178 | -1.007 | -1.159 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a3x_A_45 | 1a3x | A | 47 | 71 | IVRMNFSHGSYEYHKSVIDNARKSE | EEEEETTS--HHHHHHHHHHHHHHH | bbbbxaabexaaaaaaaaaaaaaaa |
1a49_A_70 | 1a49 | A | 70 | 94 | VARMNFSHGTHEYHAETIKNVRTAT | EEEEETTSS-HHHHHHHHHHHHHHH | bbbbxaabebaaaaaaaaaaaaaaa |
1pkm_*_68 | 1pkm | - | 70 | 94 | VARLNFSHGTHEYHAETIKNVRAAT | EEEEETTSS-HHHHHHHHHHHHHHH | bxbbxaabebaaaaaaaaaaaaaaa |
1pkn_*_70 | 1pkn | - | 70 | 94 | VARMNFSHGTHEYHAETIKNVRTAT | EEEEETTS--HHHHHHHHHHHHHHH | bbxbxaabexaaaaaaaaaaaaaaa |
1pky_A_28 | 1pky | A | 30 | 54 | VMRLNFSHGDYAEHGQRIQNLRNVM | EEEEETTS--HHHHHHHHHHHHHHH | bxbbxaabebaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a3x_A_45 | 1a3x | A | PGA2-PHOSPHOGLYCOLIC ACID | R - 49 |
1a3x_A_45 | 1a3x | A | PGA2-PHOSPHOGLYCOLIC ACID | N - 51 |
1a3x_A_45 | 1a3x | A | PGA2-PHOSPHOGLYCOLIC ACID | S - 53 |
1a49_A_70 | 1a49 | A | OXLOXALATE ION | R - 72 |
1a49_A_70 | 1a49 | A | MGMAGNESIUM ION | R - 72 |
1a49_A_70 | 1a49 | A | ATPADENOSINE-5'-TRIPHOSPHATE | R - 72 |
1a49_A_70 | 1a49 | A | MGMAGNESIUM ION | N - 74 |
1a49_A_70 | 1a49 | A | ATPADENOSINE-5'-TRIPHOSPHATE | N - 74 |
1a49_A_70 | 1a49 | A | ATPADENOSINE-5'-TRIPHOSPHATE | S - 76 |
1a49_A_70 | 1a49 | A | ATPADENOSINE-5'-TRIPHOSPHATE | H - 77 |
1a49_A_70 | 1a49 | A | ATPADENOSINE-5'-TRIPHOSPHATE | G - 78 |
1a49_A_70 | 1a49 | A | ATPADENOSINE-5'-TRIPHOSPHATE | Y - 82 |
1a49_A_70 | 1a49 | A | ATPADENOSINE-5'-TRIPHOSPHATE | H - 83 |
1a49_A_70 | 1a49 | A | ATPADENOSINE-5'-TRIPHOSPHATE | T - 86 |
1pkn_*_70 | 1pkn | * | PYRPYRUVIC ACID | R - 72 |
Bibliographic annotations |
Clusters included in this Subclass |
CLUSTER: EH.4.5 |
CLUSTER: EH.4.8 |