|
|
|
|
|
|
|
| Information on SUBCLASS 5.13.1 |
|
Subclass Accession number: 4011
Subclass: 5.13.1 
Type: AR beta-beta link DB: ArchDB95 Image coordinates: 
 Consensus coordinates:
|
Number of loops: 3 Average sequence ID (%) : 8.9 +/- 13.1 Average RMSD (Å) : 1.433 +/- 0.252 Consensus geometry
|
| Consensus Sequence: | phXXXXXXX |
| (φψ)-conformation: | bbpaabpbb |
| Pattern: | [FIT] | [ERY] | x | [PVY] | [HN] | [IVW] | [GNT] | [LTY] | x | [AE] | x | x | [LTV] | x | [IY] |
| Conservation: | -0.288 | -0.288 | -0.288 | -0.632 | 2.774 | 0.171 | 0.171 | -0.403 | -0.862 | 0.886 | -0.632 | 0.048 | 0.171 | -1.665 | 0.838 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1iar_B_147 | 1iar | B | 147 | 161 | FRIYNVTYLEPSLRI | EEEEEE-SS--EEEE | bbbbxbxaabxbbxb |
| 1od5_A_379 | 1od5 | A | 379 | 393 | IYSPHWNLNANSVIY | EEEEEEESS--EEEE | bxppbbxaabxbbxb |
| 1ouw_A_71 | 1ouw | A | 72 | 86 | TEMVNIGTDEYLTGI | EEEEE--TT--EEEE | bbbbbxxaabbxabb |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1od5_A_379 | 1od5 | A | MGMAGNESIUM ION | Y - 380 |
| 1od5_A_379 | 1od5 | A | MGMAGNESIUM ION | H - 383 |
| 1od5_A_379 | 1od5 | A | MGMAGNESIUM ION | N - 385 |
| 1od5_A_379 | 1od5 | A | MGMAGNESIUM ION | I - 392 |
| 1ouw_A_71 | 1ouw | A | IMDIMIDAZOLE | Y - 82 |
| PDB Site Annotated loops in this subclass |
| Loop | PDB | Chain | Site | Residue |
| 1od5_A_379 | 1od5 | A | AC4MG BINDING SITE FOR CHAIN B | H - 383 |
| Clusters included in this Subclass |
| CLUSTER: AR.5.207 |
| For any comment or web-related incidence, send an email to the webmaster. |
|