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Information on SUBCLASS 5.13.1
Subclass Accession number: 4011
Subclass: 5.13.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 8.9 +/- 13.1
Average RMSD (Å) : 1.433 +/- 0.252

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: phXXXXXXX
(φψ)-conformation: bbpaabpbb
Pattern: [FIT][ERY]x[PVY][HN][IVW][GNT][LTY]x[AE]xx[LTV]x[IY]
Conservation:-0.288-0.288-0.288-0.6322.7740.1710.171-0.403-0.8620.886-0.6320.0480.171-1.6650.838
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1iar_B_1471iar   B147161FRIYNVTYLEPSLRIEEEEEE-SS--EEEEbbbbxbxaabxbbxb
1od5_A_3791od5   A379393IYSPHWNLNANSVIYEEEEEEESS--EEEEbxppbbxaabxbbxb
1ouw_A_711ouw   A7286TEMVNIGTDEYLTGIEEEEE--TT--EEEEbbbbbxxaabbxabb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1od5_A_3791od5   A     MGMAGNESIUM ION Y - 380
1od5_A_3791od5   A     MGMAGNESIUM ION H - 383
1od5_A_3791od5   A     MGMAGNESIUM ION N - 385
1od5_A_3791od5   A     MGMAGNESIUM ION I - 392
1ouw_A_711ouw   A     IMDIMIDAZOLE Y - 82
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1od5_A_3791od5   A AC4MG BINDING SITE FOR CHAIN BH - 383

Clusters included in this Subclass
CLUSTER: AR.5.207