|
|
|
|
|
|
|
| Information on SUBCLASS 5.17.1 |
|
Subclass Accession number: 4018
Subclass: 5.17.1 
Type: AR beta-beta link DB: ArchDB95 Image coordinates: 
 Consensus coordinates:
|
Number of loops: 6 Average sequence ID (%) : 7.6 +/- 12.8 Average RMSD (Å) : 1.467 +/- 0.197 Consensus geometry
|
| Consensus Sequence: | XhpXXXhXX |
| (φψ)-conformation: | bbapappbb |
| Pattern: | [ACKTV] | [ILV] | x | [akm] | [egnt] | [fpvy] | [ksty] | [ADEPS] | [aerst] | [aepqs] | [apv] | [giktv] | x | x | [itwy] |
| Conservation: | 0.214 | 3.088 | -0.591 | -0.037 | -0.708 | -0.699 | -0.096 | 0.495 | -0.130 | -0.358 | 0.909 | -0.892 | -0.408 | -0.930 | 0.145 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1anu_*_94 | 1anu | - | 98 | 112 | KIRATVKSSAPGYIT | EEEEEE--SS-EEEE | bxbbxxabaxpbxbb |
| 1h0d_B_135 | 1h0d | B | 140 | 154 | CLVKGYFPEPVTVTW | EEEEEE-SS--EEEE | bbbbvbapaxbbbbb |
| 1na8_A_540 | 1na8 | A | 544 | 558 | VVSMLSTAPQPIRNI | EEEEEE--SS-EEEE | xxbbbbaxabxbblx |
| 1pzd_A_672 | 1pzd | A | 678 | 692 | TVQMEPSEAYEVLCY | EEEEEESSS-EEEEE | bbxbbxaxaxxxabb |
| 1rhh_A_128 | 1rhh | A | 133 | 147 | CLLNNFYPREAKVQW | EEEEEESSS--EEEE | bbbblbapaxbbbbx |
| 1rwr_A_75 | 1rwr | A | 75 | 89 | AILAEVTDTSPSRLA | EEEEEE-SS--EEEE | bbbbbxaxaxxbbbb |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1h0d_B_135 | 1h0d | B | GOLGLYCEROL | K - 143 |
| 1h0d_B_135 | 1h0d | B | GOLGLYCEROL | G - 144 |
| PDB Site Annotated loops in this subclass |
| Loop | PDB | Chain | Site | Residue |
| 1h0d_B_135 | 1h0d | B | GB2GOL BINDING SITE FOR CHAIN B | K - 143 |
| Clusters included in this Subclass |
| CLUSTER: AR.4.111 |
| For any comment or web-related incidence, send an email to the webmaster. |
|