Information on SUBCLASS 5.30.1 |
Subclass Accession number: 4034
Subclass: 5.30.1 Type: AR beta-beta link DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 30.7 +/- 23.4 Average RMSD (Å) : 0.440 +/- 0.114 Consensus geometry
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Consensus Sequence: | VThcXpGXh |
(φψ)-conformation: | bbppaalbb |
Pattern: | [DSTV] | [FV] | [LT] | [ATV] | [DGS] | [AS] | x | [G] | x | [AIV] | [PST] | [AFTV] | [PQS] | [CFLM] |
Conservation: | -0.834 | 0.308 | 0.587 | -0.136 | 0.046 | 0.504 | -0.713 | 2.996 | -1.084 | -0.122 | -0.117 | -0.846 | -0.221 | -0.366 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dqt_A_8 | 1dqt | A | 8 | 21 | VVLASSHGVASFPC | EEE--TTS-EEEEE | bbxxxaavbbbbxb |
1j48_A_49 | 1j48 | A | 50 | 63 | SFTTDASGAASFSF | EEE--TTS-EEEEE | bbbbxaavbbbbxb |
1noa_*_53 | 1noa | - | 54 | 67 | SVTADANGSASTSL | EEE--TTS-EEEEE | bbbxxaavbbbbbb |
2mcm_*_52 | 2mcm | - | 53 | 66 | DVTADAAGKITAQL | EEE--TTS-EEEEE | bbxxxaavbbbbxb |
7taa_*_441 | 7taa | - | 442 | 455 | TVTVGSDGNVPVPM | EEE--TTS-EEEEE | bbbxxaavxbwxwb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
2mcm_*_52 | 2mcm | * | MPD2-METHYL-2,4-PENTANEDIOL | T - 52 |
2mcm_*_52 | 2mcm | * | MPD2-METHYL-2,4-PENTANEDIOL | Q - 65 |
2mcm_*_52 | 2mcm | * | MPD2-METHYL-2,4-PENTANEDIOL | L - 66 |
2mcm_*_52 | 2mcm | * | MPD2-METHYL-2,4-PENTANEDIOL | K - 67 |
2mcm_*_52 | 2mcm | * | MPD2-METHYL-2,4-PENTANEDIOL | V - 68 |
Clusters included in this Subclass |
CLUSTER: AR.7.45 |