Information on SUBCLASS 5.40.1 |
Subclass Accession number: 4044
Subclass: 5.40.1 ![]() Type: AR beta-beta link DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 4 Average sequence ID (%) : 8.8 +/- 9.1 Average RMSD (Å) : 1.125 +/- 0.330 Consensus geometry
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Consensus Sequence: | XphhcXXXX |
(φψ)-conformation: | bbppgpabb |
Pattern: | x | x | x | x | [ILP] | [AEP] | [GN] | x | x | [ANQS] | x | [PQT] | x | [AGSV] | [ILV] | [FPT] | [GNSV] |
Conservation: | -0.995 | -0.450 | -0.917 | 0.241 | -0.028 | 0.170 | 2.508 | -0.762 | -0.450 | 0.095 | -0.317 | 0.456 | -0.217 | -0.450 | 2.335 | -0.456 | -0.762 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1hr6_B_36 | 1hr6 | B | 38 | 54 | ATEYIPNTSSATVGIFV | EEEE-SS-SEEEEEEEE | bbbxbxlbabbbbbbbb |
1l4i_A_8 | 1l4i | A | 8 | 24 | RVIYPEGQKQVQLAVTN | EEEEETT-SEEEEEEEE | bbxbxpgxabbbbxbbx |
1p2z_A_664 | 1p2z | A | 668 | 684 | LYPIPANATNVPISIPS | EEEE-TT--EEEEEEEE | bbxbppvxabbxbbbpp |
1p9l_A_180 | 1p9l | A | 183 | 199 | HAVRLAGLVAHQEVLFG | EEEE-TT--EEEEEEEE | bbbbbpgxabbbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1p9l_A_180 | 1p9l | A | PDCPYRIDINE-2,6-DICARBOXYLIC ACID | V - 191 |
1p9l_A_180 | 1p9l | A | PDCPYRIDINE-2,6-DICARBOXYLIC ACID | A - 192 |
1p9l_A_180 | 1p9l | A | PG4TETRAETHYLENE GLYCOL | E - 195 |
1p9l_A_180 | 1p9l | A | PG4TETRAETHYLENE GLYCOL | L - 197 |
Clusters included in this Subclass |
CLUSTER: AR.4.177 |